Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX6-2Q9C056 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 AL357033.4-201ENST00000617703 1807 ntBASIC14.22□□□□□ -0.13
NKX6-2Q9C056 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 MYLKP1-201ENST00000509077 1580 ntBASIC14.22□□□□□ -0.13
NKX6-2Q9C056 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 BX276092.2-201ENST00000417668 665 ntBASIC14.22□□□□□ -0.13
NKX6-2Q9C056 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX6-2Q9C056 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 FLJ16779-201ENST00000612722 7638 ntBASIC14.21□□□□□ -0.13
NKX6-2Q9C056 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms