Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 HLA-DQB1-201ENST00000374943 1656 ntBASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 ZNF259P1-201ENST00000407656 1365 ntBASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 PP12613-201ENST00000424958 2230 ntBASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 INIP-202ENST00000374236 874 ntTSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 KLF4P1-201ENST00000412782 1185 ntBASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 BX842568.4-201ENST00000421222 227 ntBASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 KRT18P3-201ENST00000451602 1288 ntBASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC122714.2-201ENST00000502787 707 ntBASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AL513190.1-201ENST00000621254 727 ntBASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC097637.2-201ENST00000624096 1997 ntBASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRTAP4-3Q9BYR4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms