Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.78■□□□□ 0.44
SEMA3CQ99985 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 AC004870.1-201ENST00000315132 882 ntBASIC17.78■□□□□ 0.44
SEMA3CQ99985 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.78■□□□□ 0.44
SEMA3CQ99985 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.78■□□□□ 0.44
SEMA3CQ99985 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.78■□□□□ 0.44
SEMA3CQ99985 ABCD1P5-201ENST00000445663 754 ntBASIC17.78■□□□□ 0.44
SEMA3CQ99985 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.78■□□□□ 0.44
SEMA3CQ99985 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.78■□□□□ 0.44
SEMA3CQ99985 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 AL139327.4-201ENST00000612362 153 ntBASIC17.78■□□□□ 0.44
SEMA3CQ99985 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SEMA3CQ99985 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.78■□□□□ 0.44
SEMA3CQ99985 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SEMA3CQ99985 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA3CQ99985 AL138688.1-201ENST00000624851 1594 ntBASIC17.78■□□□□ 0.44
SEMA3CQ99985 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 AC026471.1-201ENST00000564629 3026 ntBASIC17.77■□□□□ 0.44
SEMA3CQ99985 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 AC073592.5-201ENST00000624854 528 ntBASIC17.77■□□□□ 0.44
SEMA3CQ99985 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 PP12613-201ENST00000424958 2230 ntBASIC17.77■□□□□ 0.44
SEMA3CQ99985 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA3CQ99985 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.77■□□□□ 0.44
SEMA3CQ99985 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.77■□□□□ 0.43
SEMA3CQ99985 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA3CQ99985 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.77■□□□□ 0.43
SEMA3CQ99985 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.77■□□□□ 0.43
SEMA3CQ99985 AC132938.5-201ENST00000624980 1813 ntBASIC17.77■□□□□ 0.43
SEMA3CQ99985 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA3CQ99985 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA3CQ99985 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA3CQ99985 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA3CQ99985 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA3CQ99985 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 PMPCAP1-201ENST00000508114 1576 ntBASIC17.76■□□□□ 0.43
SEMA3CQ99985 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 STK25P1-201ENST00000585406 838 ntBASIC17.76■□□□□ 0.43
SEMA3CQ99985 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.76■□□□□ 0.43
SEMA3CQ99985 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 AP001269.4-201ENST00000609611 512 ntBASIC17.76■□□□□ 0.43
SEMA3CQ99985 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 AP000867.4-201ENST00000641616 219 ntBASIC17.76■□□□□ 0.43
SEMA3CQ99985 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA3CQ99985 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms