Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.34■□□□□ 0.53
SMOQ99835 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SMOQ99835 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SMOQ99835 NCF1C-201ENST00000438382 1427 ntBASIC18.34■□□□□ 0.53
SMOQ99835 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.34■□□□□ 0.53
SMOQ99835 AC073621.1-201ENST00000392730 636 ntBASIC18.34■□□□□ 0.53
SMOQ99835 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.34■□□□□ 0.53
SMOQ99835 LINC00982-205ENST00000420957 435 ntBASIC18.34■□□□□ 0.53
SMOQ99835 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
SMOQ99835 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.34■□□□□ 0.53
SMOQ99835 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.34■□□□□ 0.53
SMOQ99835 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.34■□□□□ 0.53
SMOQ99835 BX640515.1-201ENST00000617215 977 ntBASIC18.34■□□□□ 0.53
SMOQ99835 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SMOQ99835 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.34■□□□□ 0.53
SMOQ99835 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMOQ99835 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SMOQ99835 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMOQ99835 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMOQ99835 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SMOQ99835 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
SMOQ99835 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMOQ99835 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.33■□□□□ 0.52
SMOQ99835 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMOQ99835 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.33■□□□□ 0.52
SMOQ99835 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMOQ99835 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.33■□□□□ 0.52
SMOQ99835 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.33■□□□□ 0.52
SMOQ99835 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.33■□□□□ 0.52
SMOQ99835 AC092910.1-201ENST00000482027 1129 ntBASIC18.33■□□□□ 0.52
SMOQ99835 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.33■□□□□ 0.52
SMOQ99835 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.33■□□□□ 0.52
SMOQ99835 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.33■□□□□ 0.52
SMOQ99835 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.33■□□□□ 0.52
SMOQ99835 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.33■□□□□ 0.52
SMOQ99835 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SMOQ99835 AC120114.3-201ENST00000611923 658 ntBASIC18.33■□□□□ 0.52
SMOQ99835 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
SMOQ99835 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.33■□□□□ 0.52
SMOQ99835 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMOQ99835 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SMOQ99835 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMOQ99835 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.33■□□□□ 0.52
SMOQ99835 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMOQ99835 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
SMOQ99835 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.33■□□□□ 0.52
SMOQ99835 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMOQ99835 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMOQ99835 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.33■□□□□ 0.52
SMOQ99835 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.32■□□□□ 0.52
SMOQ99835 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SMOQ99835 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.32■□□□□ 0.52
SMOQ99835 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.32■□□□□ 0.52
SMOQ99835 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.32■□□□□ 0.52
SMOQ99835 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.32■□□□□ 0.52
SMOQ99835 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.32■□□□□ 0.52
SMOQ99835 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.32■□□□□ 0.52
SMOQ99835 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.32■□□□□ 0.52
SMOQ99835 AC006557.2-201ENST00000592985 1240 ntBASIC18.32■□□□□ 0.52
SMOQ99835 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.32■□□□□ 0.52
SMOQ99835 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 AC006504.4-201ENST00000592118 1568 ntBASIC18.32■□□□□ 0.52
SMOQ99835 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.32■□□□□ 0.52
SMOQ99835 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SMOQ99835 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SMOQ99835 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SMOQ99835 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SMOQ99835 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMOQ99835 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMOQ99835 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SMOQ99835 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMOQ99835 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.31■□□□□ 0.52
SMOQ99835 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMOQ99835 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SMOQ99835 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMOQ99835 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.31■□□□□ 0.52
SMOQ99835 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMOQ99835 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMOQ99835 ELK2BP-201ENST00000415014 1224 ntBASIC18.31■□□□□ 0.52
SMOQ99835 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms