Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CPNE1Q99829 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE1Q99829 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE1Q99829 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE1Q99829 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CPNE1Q99829 MYCLP1-201ENST00000372451 1075 ntBASIC17.53■□□□□ 0.4
CPNE1Q99829 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE1Q99829 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.53■□□□□ 0.4
CPNE1Q99829 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE1Q99829 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE1Q99829 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.53■□□□□ 0.4
CPNE1Q99829 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPNE1Q99829 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CPNE1Q99829 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CPNE1Q99829 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE1Q99829 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CPNE1Q99829 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE1Q99829 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE1Q99829 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE1Q99829 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE1Q99829 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE1Q99829 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE1Q99829 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE1Q99829 RNF126P1-202ENST00000569893 925 ntBASIC17.52■□□□□ 0.4
CPNE1Q99829 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CPNE1Q99829 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE1Q99829 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE1Q99829 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE1Q99829 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.52■□□□□ 0.39
CPNE1Q99829 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE1Q99829 LINC02012-201ENST00000608206 1725 ntBASIC17.52■□□□□ 0.39
CPNE1Q99829 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE1Q99829 AC106886.4-201ENST00000623557 2502 ntBASIC17.52■□□□□ 0.39
CPNE1Q99829 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE1Q99829 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.52■□□□□ 0.39
CPNE1Q99829 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPNE1Q99829 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 AK4P3-201ENST00000418260 669 ntBASIC17.51■□□□□ 0.39
CPNE1Q99829 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPNE1Q99829 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.51■□□□□ 0.39
CPNE1Q99829 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.51■□□□□ 0.39
CPNE1Q99829 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE1Q99829 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.51■□□□□ 0.39
CPNE1Q99829 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE1Q99829 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE1Q99829 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CPNE1Q99829 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE1Q99829 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE1Q99829 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE1Q99829 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CPNE1Q99829 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CPNE1Q99829 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE1Q99829 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms