Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.16■□□□□ 0.98
EYA3Q99504 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.16■□□□□ 0.98
EYA3Q99504 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.16■□□□□ 0.98
EYA3Q99504 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
EYA3Q99504 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.16■□□□□ 0.98
EYA3Q99504 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.16■□□□□ 0.98
EYA3Q99504 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.16■□□□□ 0.98
EYA3Q99504 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.16■□□□□ 0.98
EYA3Q99504 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.16■□□□□ 0.98
EYA3Q99504 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
EYA3Q99504 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.16■□□□□ 0.98
EYA3Q99504 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
EYA3Q99504 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.15■□□□□ 0.98
EYA3Q99504 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 AC004461.1-201ENST00000412461 403 ntBASIC21.15■□□□□ 0.98
EYA3Q99504 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
EYA3Q99504 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.15■□□□□ 0.98
EYA3Q99504 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.15■□□□□ 0.98
EYA3Q99504 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.15■□□□□ 0.98
EYA3Q99504 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.15■□□□□ 0.98
EYA3Q99504 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
EYA3Q99504 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
EYA3Q99504 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.15■□□□□ 0.98
EYA3Q99504 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EYA3Q99504 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
EYA3Q99504 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
EYA3Q99504 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EYA3Q99504 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
EYA3Q99504 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
EYA3Q99504 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EYA3Q99504 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.14■□□□□ 0.98
EYA3Q99504 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
EYA3Q99504 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.14■□□□□ 0.98
EYA3Q99504 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
EYA3Q99504 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EYA3Q99504 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EYA3Q99504 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.14■□□□□ 0.97
EYA3Q99504 AL513480.1-201ENST00000451731 511 ntBASIC21.14■□□□□ 0.97
EYA3Q99504 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.14■□□□□ 0.97
EYA3Q99504 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
EYA3Q99504 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.14■□□□□ 0.97
EYA3Q99504 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.14■□□□□ 0.97
EYA3Q99504 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
EYA3Q99504 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EYA3Q99504 AL121761.2-201ENST00000598007 1648 ntBASIC21.14■□□□□ 0.97
EYA3Q99504 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EYA3Q99504 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
EYA3Q99504 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EYA3Q99504 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
EYA3Q99504 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EYA3Q99504 REXO1L9P-201ENST00000604264 2108 ntBASIC21.13■□□□□ 0.97
EYA3Q99504 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EYA3Q99504 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EYA3Q99504 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
EYA3Q99504 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
EYA3Q99504 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.13■□□□□ 0.97
EYA3Q99504 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.13■□□□□ 0.97
EYA3Q99504 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
EYA3Q99504 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EYA3Q99504 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EYA3Q99504 AC112191.1-201ENST00000523689 701 ntBASIC21.13■□□□□ 0.97
EYA3Q99504 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.13■□□□□ 0.97
EYA3Q99504 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.13■□□□□ 0.97
EYA3Q99504 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.13■□□□□ 0.97
EYA3Q99504 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EYA3Q99504 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EYA3Q99504 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EYA3Q99504 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
EYA3Q99504 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EYA3Q99504 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EYA3Q99504 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
EYA3Q99504 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EYA3Q99504 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.12■□□□□ 0.97
EYA3Q99504 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.12■□□□□ 0.97
EYA3Q99504 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
EYA3Q99504 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.12■□□□□ 0.97
EYA3Q99504 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
EYA3Q99504 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms