Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
AP1S3Q96PC3 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 KSR1P1-201ENST00000446298 240 ntBASIC13.3□□□□□ -0.28
AP1S3Q96PC3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 AC011298.2-201ENST00000617989 482 ntBASIC13.3□□□□□ -0.28
AP1S3Q96PC3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP1S3Q96PC3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 AC034236.2-201ENST00000606662 1610 ntBASIC13.29□□□□□ -0.28
AP1S3Q96PC3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.29□□□□□ -0.28
AP1S3Q96PC3 MCCD1P1-208ENST00000445732 328 ntBASIC13.29□□□□□ -0.28
AP1S3Q96PC3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 AC008403.3-201ENST00000598924 454 ntBASIC13.29□□□□□ -0.28
AP1S3Q96PC3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP1S3Q96PC3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms