Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 AL805961.1-202ENST00000641562 540 ntBASIC17.54■□□□□ 0.4
SIPA1Q96FS4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 AL138781.2-201ENST00000617896 1843 ntBASIC17.54■□□□□ 0.4
SIPA1Q96FS4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 GPR89P-201ENST00000407924 1495 ntBASIC17.53■□□□□ 0.4
SIPA1Q96FS4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 MCCD1P2-201ENST00000423228 335 ntBASIC17.53■□□□□ 0.4
SIPA1Q96FS4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.53■□□□□ 0.4
SIPA1Q96FS4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 AC211486.1-202ENST00000416371 468 ntBASIC17.52■□□□□ 0.4
SIPA1Q96FS4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 LINC00982-205ENST00000420957 435 ntBASIC17.52■□□□□ 0.4
SIPA1Q96FS4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 HCG4B-203ENST00000450128 991 ntBASIC17.52■□□□□ 0.4
SIPA1Q96FS4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 AC211476.1-201ENST00000503899 468 ntBASIC17.52■□□□□ 0.4
SIPA1Q96FS4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIPA1Q96FS4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.52■□□□□ 0.39
SIPA1Q96FS4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms