Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 AP002383.4-201ENST00000442518 975 ntBASIC17.13■□□□□ 0.33
ATL1Q8WXF7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 AC111152.3-201ENST00000569699 673 ntBASIC17.13■□□□□ 0.33
ATL1Q8WXF7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATL1Q8WXF7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 LINC00265-3P-201ENST00000447588 903 ntBASIC17.12■□□□□ 0.33
ATL1Q8WXF7 KRT17P6-201ENST00000453795 1220 ntBASIC17.12■□□□□ 0.33
ATL1Q8WXF7 MINOS1P3-201ENST00000457048 203 ntBASIC17.12■□□□□ 0.33
ATL1Q8WXF7 TOB2P1-201ENST00000469761 992 ntBASIC17.12■□□□□ 0.33
ATL1Q8WXF7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATL1Q8WXF7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.11■□□□□ 0.33
ATL1Q8WXF7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms