Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 AL662844.4-201ENST00000606367 2838 ntBASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.43■□□□□ 0.38
CKAP2Q8WWK9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 AL513477.1-201ENST00000602865 2407 ntBASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 AC079328.2-201ENST00000561241 3354 ntBASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 AC132872.4-202ENST00000622924 2756 ntBASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CKAP2Q8WWK9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 CRYGFP-201ENST00000418459 633 ntBASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 KRT18P65-201ENST00000439811 1286 ntBASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 AL353719.1-201ENST00000566847 864 ntBASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms