Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC004911.1-201ENST00000416316 871 ntBASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC004951.3-201ENST00000418645 1148 ntBASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 ZNRF2P3-201ENST00000424200 374 ntBASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC132938.6-201ENST00000623828 1655 ntBASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AL024508.2-201ENST00000607749 1894 ntBASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 RNF216P1-203ENST00000404404 2427 ntBASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 POM121L13P-201ENST00000422362 380 ntBASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 AC004980.1-204ENST00000429707 299 ntBASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 AC036111.1-201ENST00000533973 1582 ntBASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 AC005052.1-201ENST00000625181 2492 ntBASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMIM11BQ8TCY0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM11BQ8TCY0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms