Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 AC010327.4-202ENST00000591484 748 ntBASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 AC019129.2-201ENST00000609837 1235 ntBASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 AL589182.2-201ENST00000619332 1049 ntBASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHKBP1Q8TBC3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 AC135776.1-201ENST00000319817 2481 ntBASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 YBX2P1-201ENST00000394192 760 ntBASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 UPF3AP3-201ENST00000420996 769 ntBASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 AC092183.1-201ENST00000469884 875 ntBASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 AC108751.1-201ENST00000490852 363 ntBASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 AC040169.1-201ENST00000565382 521 ntBASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 PGM5P2-202ENST00000637225 1043 ntBASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.37■□□□□ 0.53
SHKBP1Q8TBC3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 RPSAP43-201ENST00000402237 625 ntBASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 ELK2BP-201ENST00000415014 1224 ntBASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 AL691403.2-201ENST00000618460 490 ntBASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 AC004706.3-202ENST00000621574 984 ntBASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHKBP1Q8TBC3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 ABALON-201ENST00000629058 1903 ntBASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 KLF4P1-201ENST00000412782 1185 ntBASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 GPX1P2-201ENST00000429271 606 ntBASIC18.35■□□□□ 0.53
SHKBP1Q8TBC3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms