Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTL9Q8NET4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 AL354751.1-201ENST00000412768 1863 ntBASIC21.48■■□□□ 1.03
RTL9Q8NET4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTL9Q8NET4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTL9Q8NET4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 PDPK2P-202ENST00000562415 1191 ntBASIC21.48■■□□□ 1.03
RTL9Q8NET4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 MIR4469-201ENST00000583919 79 ntBASIC21.48■■□□□ 1.03
RTL9Q8NET4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.48■■□□□ 1.03
RTL9Q8NET4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 PAWRP1-201ENST00000451083 565 ntBASIC21.47■■□□□ 1.03
RTL9Q8NET4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 AC005829.1-201ENST00000570002 483 ntBASIC21.47■■□□□ 1.03
RTL9Q8NET4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RTL9Q8NET4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTL9Q8NET4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL9Q8NET4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTL9Q8NET4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL9Q8NET4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL9Q8NET4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL9Q8NET4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 HTR5BP-201ENST00000430851 1154 ntBASIC21.46■■□□□ 1.03
RTL9Q8NET4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.46■■□□□ 1.03
RTL9Q8NET4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTL9Q8NET4 C20orf181-201ENST00000623918 480 ntBASIC21.46■■□□□ 1.03
RTL9Q8NET4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL9Q8NET4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RTL9Q8NET4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.45■■□□□ 1.03
RTL9Q8NET4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.45■■□□□ 1.02
RTL9Q8NET4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RTL9Q8NET4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 MKNK2P1-201ENST00000437526 628 ntBASIC21.45■■□□□ 1.02
RTL9Q8NET4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.45■■□□□ 1.02
RTL9Q8NET4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.45■■□□□ 1.02
RTL9Q8NET4 RFPL4AP1-201ENST00000530883 850 ntBASIC21.45■■□□□ 1.02
RTL9Q8NET4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RTL9Q8NET4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
RTL9Q8NET4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.45■■□□□ 1.02
RTL9Q8NET4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTL9Q8NET4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
RTL9Q8NET4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.44■■□□□ 1.02
RTL9Q8NET4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.44■■□□□ 1.02
RTL9Q8NET4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
RTL9Q8NET4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.44■■□□□ 1.02
RTL9Q8NET4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL9Q8NET4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RTL9Q8NET4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RTL9Q8NET4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms