Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 HMGA1P7-201ENST00000406908 502 ntBASIC24.03■■□□□ 1.44
XRN1Q8IZH2 COX5BP8-201ENST00000416911 349 ntBASIC24.03■■□□□ 1.44
XRN1Q8IZH2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC24.03■■□□□ 1.44
XRN1Q8IZH2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 AC109635.5-201ENST00000533593 962 ntBASIC24.03■■□□□ 1.44
XRN1Q8IZH2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC24.03■■□□□ 1.44
XRN1Q8IZH2 AC135776.1-201ENST00000319817 2481 ntBASIC24.03■■□□□ 1.44
XRN1Q8IZH2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 CALY-202ENST00000368555 783 ntTSL 2 BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 SPDYE7P-202ENST00000420373 878 ntBASIC24.02■■□□□ 1.44
XRN1Q8IZH2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC24.02■■□□□ 1.44
XRN1Q8IZH2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 AP000997.3-201ENST00000623333 2250 ntBASIC24.02■■□□□ 1.44
XRN1Q8IZH2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC24.02■■□□□ 1.44
XRN1Q8IZH2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
XRN1Q8IZH2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
XRN1Q8IZH2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 SERBP1P5-201ENST00000510079 1181 ntBASIC24.01■■□□□ 1.43
XRN1Q8IZH2 IGHV3-42-201ENST00000520410 361 ntBASIC24.01■■□□□ 1.43
XRN1Q8IZH2 KRT8P23-201ENST00000560090 1207 ntBASIC24.01■■□□□ 1.43
XRN1Q8IZH2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 TSSK5P-201ENST00000423978 907 ntBASIC24.01■■□□□ 1.43
XRN1Q8IZH2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 AC005412.3-201ENST00000580309 715 ntBASIC24.01■■□□□ 1.43
XRN1Q8IZH2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 AC025048.6-201ENST00000634326 1161 ntBASIC24.01■■□□□ 1.43
XRN1Q8IZH2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC24.01■■□□□ 1.43
XRN1Q8IZH2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
XRN1Q8IZH2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
XRN1Q8IZH2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24■■□□□ 1.43
XRN1Q8IZH2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC24■■□□□ 1.43
XRN1Q8IZH2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
XRN1Q8IZH2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC24■■□□□ 1.43
XRN1Q8IZH2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
XRN1Q8IZH2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC24■■□□□ 1.43
XRN1Q8IZH2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC24■■□□□ 1.43
XRN1Q8IZH2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC24■■□□□ 1.43
XRN1Q8IZH2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
XRN1Q8IZH2 MIR3909-201ENST00000579518 119 ntBASIC24■■□□□ 1.43
XRN1Q8IZH2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
XRN1Q8IZH2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
XRN1Q8IZH2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
XRN1Q8IZH2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
XRN1Q8IZH2 KRT18P55-202ENST00000578578 1546 ntBASIC24■■□□□ 1.43
XRN1Q8IZH2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 GK-202ENST00000378941 458 ntTSL 3 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
XRN1Q8IZH2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
XRN1Q8IZH2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
XRN1Q8IZH2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC23.98■■□□□ 1.43
XRN1Q8IZH2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC23.98■■□□□ 1.43
XRN1Q8IZH2 AC097493.3-201ENST00000509725 367 ntBASIC23.98■■□□□ 1.43
XRN1Q8IZH2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
XRN1Q8IZH2 ALG1L8P-201ENST00000533887 760 ntBASIC23.98■■□□□ 1.43
XRN1Q8IZH2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
XRN1Q8IZH2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC23.98■■□□□ 1.43
XRN1Q8IZH2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms