Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 AC009949.1-201ENST00000623048 1830 ntBASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 COX5BP2-201ENST00000392354 334 ntBASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 FGFR3P6-201ENST00000457012 610 ntBASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 AL773604.1-201ENST00000617417 272 ntBASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRIM48Q8IWZ4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 BX276092.7-203ENST00000637198 1536 ntBASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 MRPL3P1-201ENST00000400109 1033 ntBASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 KRT18P67-201ENST00000432816 1264 ntBASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 DDX43P3-201ENST00000441064 443 ntBASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 AL356309.3-201ENST00000624132 1934 ntBASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 AC138028.4-201ENST00000564984 1845 ntBASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM48Q8IWZ4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.34
TRIM48Q8IWZ4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
TRIM48Q8IWZ4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM48Q8IWZ4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms