Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 AC092474.2-201ENST00000424288 719 ntBASIC18.57■□□□□ 0.56
RNF135Q8IUD6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 MKNK2P1-201ENST00000437526 628 ntBASIC18.57■□□□□ 0.56
RNF135Q8IUD6 CEND1P1-201ENST00000451006 455 ntBASIC18.57■□□□□ 0.56
RNF135Q8IUD6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 BX005266.1-201ENST00000473402 457 ntBASIC18.57■□□□□ 0.56
RNF135Q8IUD6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 AC006557.2-201ENST00000592985 1240 ntBASIC18.57■□□□□ 0.56
RNF135Q8IUD6 AL078644.1-201ENST00000609881 752 ntBASIC18.57■□□□□ 0.56
RNF135Q8IUD6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 AC093028.1-201ENST00000622998 982 ntBASIC18.57■□□□□ 0.56
RNF135Q8IUD6 AP000867.4-201ENST00000641616 219 ntBASIC18.57■□□□□ 0.56
RNF135Q8IUD6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF135Q8IUD6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 LINC01126-201ENST00000623515 1646 ntBASIC18.56■□□□□ 0.56
RNF135Q8IUD6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 ESPNP-201ENST00000270691 2015 ntBASIC18.56■□□□□ 0.56
RNF135Q8IUD6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 AC073621.1-201ENST00000392730 636 ntBASIC18.56■□□□□ 0.56
RNF135Q8IUD6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 HLA-J-202ENST00000469281 1241 ntBASIC18.56■□□□□ 0.56
RNF135Q8IUD6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 AC027612.4-201ENST00000605371 583 ntBASIC18.56■□□□□ 0.56
RNF135Q8IUD6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 AC073592.3-201ENST00000625118 1834 ntBASIC18.56■□□□□ 0.56
RNF135Q8IUD6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNF135Q8IUD6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.55■□□□□ 0.56
RNF135Q8IUD6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 AL024508.2-201ENST00000607749 1894 ntBASIC18.55■□□□□ 0.56
RNF135Q8IUD6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.55■□□□□ 0.56
RNF135Q8IUD6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF135Q8IUD6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms