Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC002558.1-201ENST00000488906 803 ntBASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 LINC01711-201ENST00000598340 967 ntBASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 IFNL4P1-201ENST00000607083 540 ntBASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 KRT8P10-201ENST00000450021 1447 ntBASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 AC026396.1-201ENST00000419388 421 ntBASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 AC132008.2-207ENST00000454517 770 ntBASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 UNC93B7-201ENST00000509439 705 ntBASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD3Q7Z3D4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 AP001269.4-201ENST00000609611 512 ntBASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 AD001527.2-201ENST00000622994 785 ntBASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD3Q7Z3D4 PCDHA12-202ENST00000613593 2588 ntBASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 AL353593.2-201ENST00000602529 1483 ntBASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms