Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 KRT8P47-201ENST00000604727 1398 ntBASIC15.87■□□□□ 0.13
SHFQ7M4L6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 FLJ38576-201ENST00000623820 2459 ntBASIC15.87■□□□□ 0.13
SHFQ7M4L6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 ECEL1P3-201ENST00000427961 737 ntBASIC15.87■□□□□ 0.13
SHFQ7M4L6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 AC034232.1-201ENST00000506026 1064 ntBASIC15.87■□□□□ 0.13
SHFQ7M4L6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 FER1L4-210ENST00000615531 5998 ntBASIC15.87■□□□□ 0.13
SHFQ7M4L6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SHFQ7M4L6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHFQ7M4L6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 TSPY15P-201ENST00000457163 923 ntBASIC15.86■□□□□ 0.13
SHFQ7M4L6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 AL157888.1-201ENST00000631930 593 ntBASIC15.86■□□□□ 0.13
SHFQ7M4L6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 KRT18P22-201ENST00000402024 1347 ntBASIC15.86■□□□□ 0.13
SHFQ7M4L6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 LINC01568-207ENST00000641790 1380 ntBASIC15.86■□□□□ 0.13
SHFQ7M4L6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHFQ7M4L6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.86■□□□□ 0.13
SHFQ7M4L6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHFQ7M4L6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.85■□□□□ 0.13
SHFQ7M4L6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms