Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 LINC00982-205ENST00000420957 435 ntBASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 AC106028.4-201ENST00000614509 607 ntBASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 KRT18P55-202ENST00000578578 1546 ntBASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 PTCHD3P3-201ENST00000403073 906 ntBASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 AC011467.4-201ENST00000594891 528 ntBASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 AL138781.2-201ENST00000617896 1843 ntBASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 AP000997.3-201ENST00000623333 2250 ntBASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC149Q6ZUS6 FLJ13224-201ENST00000313737 1514 ntBASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC149Q6ZUS6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 FAM8A3P-201ENST00000427218 844 ntBASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 PDPK2P-202ENST00000562415 1191 ntBASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC149Q6ZUS6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC149Q6ZUS6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms