Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 KLF4P1-201ENST00000412782 1185 ntBASIC15.06■□□□□ 0
COLCA1Q6ZS62 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 HCG4P8-203ENST00000443049 980 ntBASIC15.06■□□□□ 0
COLCA1Q6ZS62 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 MIR3652-201ENST00000579335 131 ntBASIC15.06■□□□□ 0
COLCA1Q6ZS62 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 AL591684.3-201ENST00000605187 298 ntBASIC15.06■□□□□ 0
COLCA1Q6ZS62 AC073592.4-201ENST00000623827 446 ntBASIC15.06■□□□□ 0
COLCA1Q6ZS62 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 SIGLEC16-201ENST00000599858 1437 ntBASIC15.06■□□□□ 0
COLCA1Q6ZS62 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.06■□□□□ 0
COLCA1Q6ZS62 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COLCA1Q6ZS62 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
COLCA1Q6ZS62 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
COLCA1Q6ZS62 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
COLCA1Q6ZS62 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
COLCA1Q6ZS62 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
COLCA1Q6ZS62 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.05■□□□□ 0
COLCA1Q6ZS62 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.05■□□□□ 0
COLCA1Q6ZS62 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.05■□□□□ 0
COLCA1Q6ZS62 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
COLCA1Q6ZS62 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COLCA1Q6ZS62 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 NUS1P2-201ENST00000417358 873 ntBASIC15.05■□□□□ -0
COLCA1Q6ZS62 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.05■□□□□ -0
COLCA1Q6ZS62 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COLCA1Q6ZS62 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
COLCA1Q6ZS62 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
COLCA1Q6ZS62 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COLCA1Q6ZS62 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
COLCA1Q6ZS62 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
COLCA1Q6ZS62 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
COLCA1Q6ZS62 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COLCA1Q6ZS62 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COLCA1Q6ZS62 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.04■□□□□ -0
COLCA1Q6ZS62 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.04■□□□□ -0
COLCA1Q6ZS62 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
COLCA1Q6ZS62 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.04■□□□□ -0
COLCA1Q6ZS62 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.04■□□□□ -0
COLCA1Q6ZS62 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.04■□□□□ -0
COLCA1Q6ZS62 AC093525.9-201ENST00000624961 1746 ntBASIC15.04■□□□□ -0
COLCA1Q6ZS62 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.04■□□□□ -0
COLCA1Q6ZS62 AL135999.2-201ENST00000622438 1686 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms