Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 LINC00982-205ENST00000420957 435 ntBASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 RPS15P9-201ENST00000494093 319 ntBASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 RNA5SP416-201ENST00000516838 111 ntBASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DCLRE1AQ6PJP8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 AC007967.2-201ENST00000432613 625 ntBASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 AL353135.1-201ENST00000606729 504 ntBASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 AC008667.4-201ENST00000607370 168 ntBASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 LINC01451-201ENST00000623792 534 ntBASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DCLRE1AQ6PJP8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 GPR89P-201ENST00000407924 1495 ntBASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 UPF3AP3-201ENST00000420996 769 ntBASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 IGHV3-65-201ENST00000523210 341 ntBASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms