Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CDR2Q01850 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.69■□□□□ 0.58
CDR2Q01850 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDR2Q01850 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.68■□□□□ 0.58
CDR2Q01850 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 AL049757.1-201ENST00000616842 1596 ntBASIC18.68■□□□□ 0.58
CDR2Q01850 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDR2Q01850 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDR2Q01850 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.68■□□□□ 0.58
CDR2Q01850 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDR2Q01850 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDR2Q01850 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.68■□□□□ 0.58
CDR2Q01850 AP002383.4-201ENST00000442518 975 ntBASIC18.68■□□□□ 0.58
CDR2Q01850 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.68■□□□□ 0.58
CDR2Q01850 AC009533.2-201ENST00000543664 586 ntBASIC18.68■□□□□ 0.58
CDR2Q01850 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CDR2Q01850 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.68■□□□□ 0.58
CDR2Q01850 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.68■□□□□ 0.58
CDR2Q01850 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.68■□□□□ 0.58
CDR2Q01850 KRT18P1-202ENST00000452408 1331 ntBASIC18.68■□□□□ 0.58
CDR2Q01850 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CDR2Q01850 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDR2Q01850 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDR2Q01850 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.67■□□□□ 0.58
CDR2Q01850 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.67■□□□□ 0.58
CDR2Q01850 AC103564.2-201ENST00000432853 1299 ntBASIC18.67■□□□□ 0.58
CDR2Q01850 DRAXINP1-201ENST00000437611 948 ntBASIC18.67■□□□□ 0.58
CDR2Q01850 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.67■□□□□ 0.58
CDR2Q01850 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.67■□□□□ 0.58
CDR2Q01850 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.67■□□□□ 0.58
CDR2Q01850 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.67■□□□□ 0.58
CDR2Q01850 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.67■□□□□ 0.58
CDR2Q01850 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.67■□□□□ 0.58
CDR2Q01850 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.67■□□□□ 0.58
CDR2Q01850 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.67■□□□□ 0.58
CDR2Q01850 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.67■□□□□ 0.58
CDR2Q01850 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.67■□□□□ 0.58
CDR2Q01850 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.67■□□□□ 0.58
CDR2Q01850 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.67■□□□□ 0.58
CDR2Q01850 AC233702.3-201ENST00000578656 1387 ntBASIC18.67■□□□□ 0.58
CDR2Q01850 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDR2Q01850 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
CDR2Q01850 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.66■□□□□ 0.58
CDR2Q01850 AC116353.5-201ENST00000638148 1699 ntBASIC18.66■□□□□ 0.58
CDR2Q01850 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
CDR2Q01850 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDR2Q01850 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.66■□□□□ 0.58
CDR2Q01850 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.66■□□□□ 0.58
CDR2Q01850 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CDR2Q01850 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.66■□□□□ 0.58
CDR2Q01850 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.66■□□□□ 0.58
CDR2Q01850 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 TPSP2-201ENST00000561760 610 ntBASIC18.66■□□□□ 0.58
CDR2Q01850 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.66■□□□□ 0.58
CDR2Q01850 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDR2Q01850 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDR2Q01850 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms