Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.37■□□□□ 0.85
IRX3P78415 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX3P78415 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.36■□□□□ 0.85
IRX3P78415 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX3P78415 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX3P78415 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX3P78415 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IRX3P78415 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
IRX3P78415 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
IRX3P78415 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.36■□□□□ 0.85
IRX3P78415 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX3P78415 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.36■□□□□ 0.85
IRX3P78415 RPS15P9-201ENST00000494093 319 ntBASIC20.36■□□□□ 0.85
IRX3P78415 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.36■□□□□ 0.85
IRX3P78415 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX3P78415 SNHG9-202ENST00000564014 471 ntBASIC20.36■□□□□ 0.85
IRX3P78415 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.36■□□□□ 0.85
IRX3P78415 AC018845.2-201ENST00000568326 409 ntBASIC20.36■□□□□ 0.85
IRX3P78415 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.36■□□□□ 0.85
IRX3P78415 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.36■□□□□ 0.85
IRX3P78415 AC073592.3-201ENST00000625118 1834 ntBASIC20.36■□□□□ 0.85
IRX3P78415 AL391005.1-201ENST00000623953 2435 ntBASIC20.36■□□□□ 0.85
IRX3P78415 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
IRX3P78415 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX3P78415 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
IRX3P78415 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IRX3P78415 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.35■□□□□ 0.85
IRX3P78415 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.35■□□□□ 0.85
IRX3P78415 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IRX3P78415 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 KRT18P28-201ENST00000453838 1332 ntBASIC20.35■□□□□ 0.85
IRX3P78415 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
IRX3P78415 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
IRX3P78415 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
IRX3P78415 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 ALG1L5P-201ENST00000482043 771 ntBASIC20.35■□□□□ 0.85
IRX3P78415 IGHV3-65-201ENST00000523210 341 ntBASIC20.35■□□□□ 0.85
IRX3P78415 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.35■□□□□ 0.85
IRX3P78415 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.35■□□□□ 0.85
IRX3P78415 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.35■□□□□ 0.85
IRX3P78415 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
IRX3P78415 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
IRX3P78415 MIR4469-201ENST00000583919 79 ntBASIC20.35■□□□□ 0.85
IRX3P78415 AC008667.4-201ENST00000607370 168 ntBASIC20.35■□□□□ 0.85
IRX3P78415 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.35■□□□□ 0.85
IRX3P78415 AC092865.6-201ENST00000642101 219 ntBASIC20.35■□□□□ 0.85
IRX3P78415 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.35■□□□□ 0.85
IRX3P78415 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IRX3P78415 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX3P78415 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX3P78415 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX3P78415 PRSS29P-201ENST00000440800 595 ntBASIC20.34■□□□□ 0.85
IRX3P78415 YBX1P5-201ENST00000509441 847 ntBASIC20.34■□□□□ 0.85
IRX3P78415 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.34■□□□□ 0.85
IRX3P78415 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
IRX3P78415 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX3P78415 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX3P78415 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX3P78415 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX3P78415 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX3P78415 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
IRX3P78415 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
IRX3P78415 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX3P78415 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
IRX3P78415 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IRX3P78415 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX3P78415 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.34■□□□□ 0.85
IRX3P78415 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
IRX3P78415 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.33■□□□□ 0.85
IRX3P78415 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IRX3P78415 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.33■□□□□ 0.85
IRX3P78415 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
IRX3P78415 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX3P78415 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX3P78415 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX3P78415 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IRX3P78415 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX3P78415 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms