Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LMO4P61968 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LMO4P61968 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LMO4P61968 AC020763.4-201ENST00000623414 4170 ntBASIC14.33□□□□□ -0.12
LMO4P61968 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LMO4P61968 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.32□□□□□ -0.12
LMO4P61968 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LMO4P61968 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LMO4P61968 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.32□□□□□ -0.12
LMO4P61968 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LMO4P61968 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.32□□□□□ -0.12
LMO4P61968 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 RHOQP3-201ENST00000437982 621 ntBASIC14.32□□□□□ -0.12
LMO4P61968 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.32□□□□□ -0.12
LMO4P61968 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.32□□□□□ -0.12
LMO4P61968 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.32□□□□□ -0.12
LMO4P61968 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.32□□□□□ -0.12
LMO4P61968 AC010507.1-201ENST00000633895 436 ntBASIC14.32□□□□□ -0.12
LMO4P61968 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.32□□□□□ -0.12
LMO4P61968 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.32□□□□□ -0.12
LMO4P61968 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LMO4P61968 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.32□□□□□ -0.12
LMO4P61968 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LMO4P61968 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
LMO4P61968 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO4P61968 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 AC135050.7-201ENST00000624508 2218 ntBASIC14.31□□□□□ -0.12
LMO4P61968 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
LMO4P61968 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.31□□□□□ -0.12
LMO4P61968 AC006116.8-202ENST00000587620 1550 ntBASIC14.31□□□□□ -0.12
LMO4P61968 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 SLC25A6P5-201ENST00000435663 894 ntBASIC14.31□□□□□ -0.12
LMO4P61968 YBX1P5-201ENST00000509441 847 ntBASIC14.31□□□□□ -0.12
LMO4P61968 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 C20orf181-201ENST00000623918 480 ntBASIC14.31□□□□□ -0.12
LMO4P61968 AC004877.2-201ENST00000623941 599 ntBASIC14.31□□□□□ -0.12
LMO4P61968 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO4P61968 LINC00304-203ENST00000565008 1864 ntBASIC14.31□□□□□ -0.12
LMO4P61968 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
LMO4P61968 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.31□□□□□ -0.12
LMO4P61968 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.31□□□□□ -0.12
LMO4P61968 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.31□□□□□ -0.12
LMO4P61968 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO4P61968 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
LMO4P61968 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LMO4P61968 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LMO4P61968 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LMO4P61968 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.3□□□□□ -0.12
LMO4P61968 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.3□□□□□ -0.12
LMO4P61968 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LMO4P61968 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LMO4P61968 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO4P61968 AC211486.1-202ENST00000416371 468 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms