Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 AGGF1P2-201ENST00000426656 2106 ntBASIC16.57■□□□□ 0.24
WNT3P56703 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
WNT3P56703 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
WNT3P56703 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.57■□□□□ 0.24
WNT3P56703 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.57■□□□□ 0.24
WNT3P56703 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
WNT3P56703 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
WNT3P56703 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.57■□□□□ 0.24
WNT3P56703 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
WNT3P56703 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
WNT3P56703 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3P56703 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.57■□□□□ 0.24
WNT3P56703 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
WNT3P56703 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3P56703 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3P56703 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.56■□□□□ 0.24
WNT3P56703 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
WNT3P56703 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3P56703 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3P56703 AC125634.1-201ENST00000438758 1403 ntBASIC16.56■□□□□ 0.24
WNT3P56703 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
WNT3P56703 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.56■□□□□ 0.24
WNT3P56703 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.56■□□□□ 0.24
WNT3P56703 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.56■□□□□ 0.24
WNT3P56703 AC011498.5-201ENST00000592027 486 ntBASIC16.56■□□□□ 0.24
WNT3P56703 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3P56703 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3P56703 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3P56703 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.56■□□□□ 0.24
WNT3P56703 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.55■□□□□ 0.24
WNT3P56703 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.55■□□□□ 0.24
WNT3P56703 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
WNT3P56703 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
WNT3P56703 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
WNT3P56703 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
WNT3P56703 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
WNT3P56703 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.55■□□□□ 0.24
WNT3P56703 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.55■□□□□ 0.24
WNT3P56703 AC005336.2-201ENST00000593183 939 ntBASIC16.55■□□□□ 0.24
WNT3P56703 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.55■□□□□ 0.24
WNT3P56703 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 LINC02012-201ENST00000608206 1725 ntBASIC16.55■□□□□ 0.24
WNT3P56703 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
WNT3P56703 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
WNT3P56703 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.55■□□□□ 0.24
WNT3P56703 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
WNT3P56703 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3P56703 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.55■□□□□ 0.24
WNT3P56703 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
WNT3P56703 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.54■□□□□ 0.24
WNT3P56703 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.54■□□□□ 0.24
WNT3P56703 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.54■□□□□ 0.24
WNT3P56703 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms