Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.11■□□□□ 0.81
HMGCS2P54868 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCS2P54868 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGCS2P54868 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.11■□□□□ 0.81
HMGCS2P54868 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HMGCS2P54868 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGCS2P54868 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCS2P54868 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.11■□□□□ 0.81
HMGCS2P54868 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGCS2P54868 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCS2P54868 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.11■□□□□ 0.81
HMGCS2P54868 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCS2P54868 AC006116.8-202ENST00000587620 1550 ntBASIC20.11■□□□□ 0.81
HMGCS2P54868 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCS2P54868 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGCS2P54868 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGCS2P54868 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.11■□□□□ 0.81
HMGCS2P54868 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HMGCS2P54868 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 TNXA-203ENST00000507684 2038 ntBASIC20.1■□□□□ 0.81
HMGCS2P54868 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 REXO1L11P-201ENST00000620964 1927 ntBASIC20.1■□□□□ 0.81
HMGCS2P54868 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCS2P54868 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.1■□□□□ 0.81
HMGCS2P54868 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HMGCS2P54868 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.1■□□□□ 0.81
HMGCS2P54868 MIR770-201ENST00000390219 98 ntBASIC20.1■□□□□ 0.81
HMGCS2P54868 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCS2P54868 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCS2P54868 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.1■□□□□ 0.81
HMGCS2P54868 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.1■□□□□ 0.81
HMGCS2P54868 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.1■□□□□ 0.81
HMGCS2P54868 AC004835.2-201ENST00000603762 682 ntBASIC20.1■□□□□ 0.81
HMGCS2P54868 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.1■□□□□ 0.81
HMGCS2P54868 ACTL9-202ENST00000612068 1252 ntBASIC20.1■□□□□ 0.81
HMGCS2P54868 AC105339.1-204ENST00000636249 355 ntBASIC20.1■□□□□ 0.81
HMGCS2P54868 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
HMGCS2P54868 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
HMGCS2P54868 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.1■□□□□ 0.81
HMGCS2P54868 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCS2P54868 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
HMGCS2P54868 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCS2P54868 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGCS2P54868 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCS2P54868 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCS2P54868 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCS2P54868 FLJ13224-201ENST00000313737 1514 ntBASIC20.09■□□□□ 0.81
HMGCS2P54868 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCS2P54868 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
HMGCS2P54868 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCS2P54868 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCS2P54868 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HMGCS2P54868 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HMGCS2P54868 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.09■□□□□ 0.81
HMGCS2P54868 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
HMGCS2P54868 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCS2P54868 AL513480.1-201ENST00000451731 511 ntBASIC20.09■□□□□ 0.81
HMGCS2P54868 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGCS2P54868 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.09■□□□□ 0.81
HMGCS2P54868 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCS2P54868 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HMGCS2P54868 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCS2P54868 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCS2P54868 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCS2P54868 AL138781.2-201ENST00000617896 1843 ntBASIC20.09■□□□□ 0.81
HMGCS2P54868 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HMGCS2P54868 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
HMGCS2P54868 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCS2P54868 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HMGCS2P54868 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCS2P54868 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
HMGCS2P54868 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HMGCS2P54868 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.08■□□□□ 0.81
HMGCS2P54868 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.08■□□□□ 0.81
HMGCS2P54868 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.08■□□□□ 0.81
HMGCS2P54868 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
HMGCS2P54868 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCS2P54868 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
HMGCS2P54868 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCS2P54868 AC004449.1-201ENST00000564240 433 ntBASIC20.08■□□□□ 0.81
HMGCS2P54868 REXO1L3P-201ENST00000622202 1288 ntBASIC20.08■□□□□ 0.81
HMGCS2P54868 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HMGCS2P54868 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGCS2P54868 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HMGCS2P54868 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGCS2P54868 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.08■□□□□ 0.8
HMGCS2P54868 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms