Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6CP51160 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PDE6CP51160 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDE6CP51160 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.96■□□□□ 0.63
PDE6CP51160 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE6CP51160 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6CP51160 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.95■□□□□ 0.62
PDE6CP51160 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PDE6CP51160 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDE6CP51160 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.95■□□□□ 0.62
PDE6CP51160 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE6CP51160 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.95■□□□□ 0.62
PDE6CP51160 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDE6CP51160 AC099336.1-202ENST00000602961 463 ntBASIC18.95■□□□□ 0.62
PDE6CP51160 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.95■□□□□ 0.62
PDE6CP51160 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.95■□□□□ 0.62
PDE6CP51160 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6CP51160 AC009053.2-201ENST00000563701 2365 ntBASIC18.95■□□□□ 0.62
PDE6CP51160 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6CP51160 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6CP51160 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE6CP51160 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE6CP51160 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 IGHV3-47-201ENST00000425060 335 ntBASIC18.94■□□□□ 0.62
PDE6CP51160 MINOS1P3-201ENST00000457048 203 ntBASIC18.94■□□□□ 0.62
PDE6CP51160 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6CP51160 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6CP51160 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6CP51160 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 AC141586.5-201ENST00000624546 2050 ntBASIC18.94■□□□□ 0.62
PDE6CP51160 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6CP51160 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE6CP51160 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PDE6CP51160 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE6CP51160 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE6CP51160 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PDE6CP51160 POM121L3P-201ENST00000419331 1163 ntBASIC18.93■□□□□ 0.62
PDE6CP51160 KRT16P4-201ENST00000453883 522 ntBASIC18.93■□□□□ 0.62
PDE6CP51160 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PDE6CP51160 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.93■□□□□ 0.62
PDE6CP51160 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE6CP51160 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE6CP51160 AC138894.3-201ENST00000603787 634 ntBASIC18.93■□□□□ 0.62
PDE6CP51160 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 AL353801.3-201ENST00000609898 542 ntBASIC18.93■□□□□ 0.62
PDE6CP51160 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE6CP51160 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDE6CP51160 NSUN5P1-202ENST00000421140 1535 ntBASIC18.93■□□□□ 0.62
PDE6CP51160 NSUN5P2-203ENST00000457352 1529 ntBASIC18.93■□□□□ 0.62
PDE6CP51160 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6CP51160 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE6CP51160 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE6CP51160 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDE6CP51160 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE6CP51160 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms