Protein–RNA interactions for Protein: P49848

TAF6, Transcription initiation factor TFIID subunit 6, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF6P49848 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.69■□□□□ 0.58
TAF6P49848 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.69■□□□□ 0.58
TAF6P49848 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.69■□□□□ 0.58
TAF6P49848 AC092910.1-201ENST00000482027 1129 ntBASIC18.69■□□□□ 0.58
TAF6P49848 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.69■□□□□ 0.58
TAF6P49848 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.69■□□□□ 0.58
TAF6P49848 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.69■□□□□ 0.58
TAF6P49848 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.69■□□□□ 0.58
TAF6P49848 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
TAF6P49848 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TAF6P49848 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF6P49848 AC046185.3-201ENST00000623228 1824 ntBASIC18.69■□□□□ 0.58
TAF6P49848 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 AC133963.1-201ENST00000504166 1679 ntBASIC18.69■□□□□ 0.58
TAF6P49848 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.69■□□□□ 0.58
TAF6P49848 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 AC007613.1-201ENST00000572811 2597 ntBASIC18.69■□□□□ 0.58
TAF6P49848 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TAF6P49848 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TAF6P49848 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
TAF6P49848 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.68■□□□□ 0.58
TAF6P49848 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TAF6P49848 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.68■□□□□ 0.58
TAF6P49848 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.68■□□□□ 0.58
TAF6P49848 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.68■□□□□ 0.58
TAF6P49848 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TAF6P49848 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TAF6P49848 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.68■□□□□ 0.58
TAF6P49848 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TAF6P49848 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 AC097637.2-201ENST00000624096 1997 ntBASIC18.68■□□□□ 0.58
TAF6P49848 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TAF6P49848 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF6P49848 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TAF6P49848 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TAF6P49848 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.67■□□□□ 0.58
TAF6P49848 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TAF6P49848 AP002414.3-201ENST00000589352 1468 ntBASIC18.67■□□□□ 0.58
TAF6P49848 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.67■□□□□ 0.58
TAF6P49848 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.67■□□□□ 0.58
TAF6P49848 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.67■□□□□ 0.58
TAF6P49848 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.67■□□□□ 0.58
TAF6P49848 KRT18P27-201ENST00000427733 1299 ntBASIC18.67■□□□□ 0.58
TAF6P49848 AP000347.1-202ENST00000435868 847 ntBASIC18.67■□□□□ 0.58
TAF6P49848 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.67■□□□□ 0.58
TAF6P49848 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.67■□□□□ 0.58
TAF6P49848 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.67■□□□□ 0.58
TAF6P49848 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.67■□□□□ 0.58
TAF6P49848 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.67■□□□□ 0.58
TAF6P49848 AC004706.3-202ENST00000621574 984 ntBASIC18.67■□□□□ 0.58
TAF6P49848 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.67■□□□□ 0.58
TAF6P49848 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TAF6P49848 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF6P49848 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.67■□□□□ 0.58
TAF6P49848 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.67■□□□□ 0.58
TAF6P49848 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TAF6P49848 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF6P49848 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TAF6P49848 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.67■□□□□ 0.58
TAF6P49848 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TAF6P49848 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
TAF6P49848 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF6P49848 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TAF6P49848 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF6P49848 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TAF6P49848 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
TAF6P49848 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF6P49848 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF6P49848 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF6P49848 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.66■□□□□ 0.58
TAF6P49848 AC098831.1-202ENST00000438821 336 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms