Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC1A6P48664 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
SLC1A6P48664 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A6P48664 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
SLC1A6P48664 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A6P48664 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A6P48664 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC1A6P48664 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A6P48664 AC112698.1-201ENST00000510299 916 ntBASIC17.25■□□□□ 0.35
SLC1A6P48664 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC1A6P48664 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC1A6P48664 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC1A6P48664 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A6P48664 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC1A6P48664 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLC1A6P48664 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLC1A6P48664 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 AL603756.1-201ENST00000606511 2163 ntBASIC17.25■□□□□ 0.35
SLC1A6P48664 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A6P48664 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC1A6P48664 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC1A6P48664 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A6P48664 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.24■□□□□ 0.35
SLC1A6P48664 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 AC009154.2-201ENST00000621177 724 ntBASIC17.24■□□□□ 0.35
SLC1A6P48664 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A6P48664 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC1A6P48664 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
SLC1A6P48664 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC1A6P48664 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC1A6P48664 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC1A6P48664 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A6P48664 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A6P48664 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC1A6P48664 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A6P48664 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A6P48664 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A6P48664 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC1A6P48664 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC1A6P48664 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC1A6P48664 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC1A6P48664 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A6P48664 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A6P48664 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms