Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PCP4P48539 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC11.97□□□□□ -0.49
PCP4P48539 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
PCP4P48539 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PCP4P48539 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
PCP4P48539 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PCP4P48539 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.97□□□□□ -0.49
PCP4P48539 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
PCP4P48539 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PCP4P48539 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PCP4P48539 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.97□□□□□ -0.49
PCP4P48539 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.97□□□□□ -0.49
PCP4P48539 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PCP4P48539 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
PCP4P48539 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC11.97□□□□□ -0.49
PCP4P48539 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PCP4P48539 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
PCP4P48539 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.96□□□□□ -0.49
PCP4P48539 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.96□□□□□ -0.49
PCP4P48539 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
PCP4P48539 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.96□□□□□ -0.49
PCP4P48539 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.96□□□□□ -0.49
PCP4P48539 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.96□□□□□ -0.49
PCP4P48539 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PCP4P48539 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC11.96□□□□□ -0.5
PCP4P48539 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
PCP4P48539 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 AC023157.3-201ENST00000619086 2088 ntBASIC11.96□□□□□ -0.5
PCP4P48539 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
PCP4P48539 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC11.96□□□□□ -0.5
PCP4P48539 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
PCP4P48539 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.96□□□□□ -0.5
PCP4P48539 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
PCP4P48539 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PCP4P48539 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
PCP4P48539 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.96□□□□□ -0.5
PCP4P48539 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC11.95□□□□□ -0.5
PCP4P48539 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
PCP4P48539 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
PCP4P48539 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.95□□□□□ -0.5
PCP4P48539 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.95□□□□□ -0.5
PCP4P48539 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
PCP4P48539 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.95□□□□□ -0.5
PCP4P48539 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC11.95□□□□□ -0.5
PCP4P48539 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
PCP4P48539 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.95□□□□□ -0.5
PCP4P48539 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.95□□□□□ -0.5
PCP4P48539 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.95□□□□□ -0.5
PCP4P48539 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC11.95□□□□□ -0.5
PCP4P48539 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.95□□□□□ -0.5
PCP4P48539 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
PCP4P48539 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PCP4P48539 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms