Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AP002383.4-201ENST00000442518 975 ntBASIC18.5■□□□□ 0.55
CHRNA3P32297 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.5■□□□□ 0.55
CHRNA3P32297 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.5■□□□□ 0.55
CHRNA3P32297 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 GPR32P1-201ENST00000601788 811 ntBASIC18.5■□□□□ 0.55
CHRNA3P32297 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHRNA3P32297 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRNA3P32297 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CHRNA3P32297 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CHRNA3P32297 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHRNA3P32297 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 KRT89P-201ENST00000620027 1478 ntBASIC18.5■□□□□ 0.55
CHRNA3P32297 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA3P32297 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHRNA3P32297 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRNA3P32297 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHRNA3P32297 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHRNA3P32297 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CHRNA3P32297 AC092329.2-201ENST00000598402 547 ntBASIC18.49■□□□□ 0.55
CHRNA3P32297 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.49■□□□□ 0.55
CHRNA3P32297 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNA3P32297 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHRNA3P32297 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHRNA3P32297 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNA3P32297 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHRNA3P32297 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNA3P32297 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CHRNA3P32297 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.48■□□□□ 0.55
CHRNA3P32297 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHRNA3P32297 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHRNA3P32297 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.48■□□□□ 0.55
CHRNA3P32297 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRNA3P32297 AC113404.2-201ENST00000507884 177 ntBASIC18.48■□□□□ 0.55
CHRNA3P32297 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.48■□□□□ 0.55
CHRNA3P32297 MIR3180-1-201ENST00000580374 94 ntBASIC18.48■□□□□ 0.55
CHRNA3P32297 MIR3180-3-201ENST00000584616 94 ntBASIC18.48■□□□□ 0.55
CHRNA3P32297 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHRNA3P32297 AP002414.4-201ENST00000589764 1148 ntBASIC18.48■□□□□ 0.55
CHRNA3P32297 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRNA3P32297 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRNA3P32297 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CHRNA3P32297 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRNA3P32297 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA3P32297 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CHRNA3P32297 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRNA3P32297 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA3P32297 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA3P32297 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHRNA3P32297 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA3P32297 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA3P32297 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA3P32297 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.47■□□□□ 0.55
CHRNA3P32297 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.47■□□□□ 0.55
CHRNA3P32297 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.47■□□□□ 0.55
CHRNA3P32297 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CHRNA3P32297 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA3P32297 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA3P32297 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA3P32297 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.47■□□□□ 0.55
CHRNA3P32297 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.47■□□□□ 0.55
CHRNA3P32297 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.47■□□□□ 0.55
CHRNA3P32297 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRNA3P32297 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRNA3P32297 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA3P32297 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms