Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXC8P31273 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXC8P31273 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXC8P31273 TSEN15P1-201ENST00000423257 515 ntBASIC18.97■□□□□ 0.63
HOXC8P31273 AL513480.1-201ENST00000451731 511 ntBASIC18.97■□□□□ 0.63
HOXC8P31273 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.97■□□□□ 0.63
HOXC8P31273 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXC8P31273 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.97■□□□□ 0.63
HOXC8P31273 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXC8P31273 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HOXC8P31273 AC004835.2-201ENST00000603762 682 ntBASIC18.97■□□□□ 0.63
HOXC8P31273 LINC02084-201ENST00000606069 1096 ntBASIC18.97■□□□□ 0.63
HOXC8P31273 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.97■□□□□ 0.63
HOXC8P31273 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXC8P31273 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC8P31273 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXC8P31273 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
HOXC8P31273 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC8P31273 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC8P31273 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC8P31273 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
HOXC8P31273 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC8P31273 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC8P31273 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.97■□□□□ 0.63
HOXC8P31273 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXC8P31273 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXC8P31273 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXC8P31273 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.96■□□□□ 0.63
HOXC8P31273 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.96■□□□□ 0.63
HOXC8P31273 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.96■□□□□ 0.63
HOXC8P31273 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.96■□□□□ 0.63
HOXC8P31273 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXC8P31273 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.96■□□□□ 0.63
HOXC8P31273 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXC8P31273 AC099522.2-201ENST00000607001 744 ntBASIC18.96■□□□□ 0.63
HOXC8P31273 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.96■□□□□ 0.63
HOXC8P31273 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXC8P31273 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXC8P31273 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HOXC8P31273 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXC8P31273 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXC8P31273 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXC8P31273 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HOXC8P31273 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXC8P31273 LYSMD4-203ENST00000378904 2122 ntBASIC18.95■□□□□ 0.62
HOXC8P31273 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC8P31273 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC8P31273 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.95■□□□□ 0.62
HOXC8P31273 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
HOXC8P31273 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXC8P31273 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
HOXC8P31273 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC8P31273 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HOXC8P31273 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC8P31273 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXC8P31273 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC8P31273 SLC25A6P5-201ENST00000435663 894 ntBASIC18.95■□□□□ 0.62
HOXC8P31273 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXC8P31273 HLA-J-203ENST00000494367 1087 ntBASIC18.95■□□□□ 0.62
HOXC8P31273 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.95■□□□□ 0.62
HOXC8P31273 AC112191.1-201ENST00000523689 701 ntBASIC18.95■□□□□ 0.62
HOXC8P31273 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.95■□□□□ 0.62
HOXC8P31273 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC8P31273 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC8P31273 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.95■□□□□ 0.62
HOXC8P31273 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXC8P31273 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.95■□□□□ 0.62
HOXC8P31273 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC8P31273 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC8P31273 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HOXC8P31273 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC8P31273 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC8P31273 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC8P31273 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC8P31273 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.94■□□□□ 0.62
HOXC8P31273 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC8P31273 AC140658.5-201ENST00000438532 169 ntBASIC18.94■□□□□ 0.62
HOXC8P31273 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC8P31273 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HOXC8P31273 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC8P31273 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.94■□□□□ 0.62
HOXC8P31273 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.94■□□□□ 0.62
HOXC8P31273 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC8P31273 AC093028.1-201ENST00000622998 982 ntBASIC18.94■□□□□ 0.62
HOXC8P31273 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.94■□□□□ 0.62
HOXC8P31273 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC8P31273 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms