Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC27P30260 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC27P30260 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC27P30260 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDC27P30260 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC27P30260 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC27P30260 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 AC003669.1-201ENST00000334569 611 ntBASIC20.31■□□□□ 0.84
CDC27P30260 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CDC27P30260 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.31■□□□□ 0.84
CDC27P30260 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC27P30260 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.31■□□□□ 0.84
CDC27P30260 IFNL4P1-201ENST00000607083 540 ntBASIC20.31■□□□□ 0.84
CDC27P30260 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CDC27P30260 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CDC27P30260 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CDC27P30260 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDC27P30260 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDC27P30260 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC27P30260 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.3■□□□□ 0.84
CDC27P30260 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDC27P30260 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CDC27P30260 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC27P30260 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC27P30260 SPDYE21P-201ENST00000413323 827 ntBASIC20.3■□□□□ 0.84
CDC27P30260 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC27P30260 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 REXO1L6P-202ENST00000619970 1078 ntBASIC20.3■□□□□ 0.84
CDC27P30260 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC27P30260 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC27P30260 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC27P30260 AC080080.1-201ENST00000625121 2420 ntBASIC20.29■□□□□ 0.84
CDC27P30260 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDC27P30260 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 AL135999.2-201ENST00000622438 1686 ntBASIC20.29■□□□□ 0.84
CDC27P30260 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CDC27P30260 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
CDC27P30260 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 AC079776.2-201ENST00000641154 1609 ntBASIC20.29■□□□□ 0.84
CDC27P30260 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.29■□□□□ 0.84
CDC27P30260 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.29■□□□□ 0.84
CDC27P30260 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.29■□□□□ 0.84
CDC27P30260 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CDC27P30260 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 AF238378.1-201ENST00000526806 358 ntBASIC20.29■□□□□ 0.84
CDC27P30260 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC27P30260 AC073592.4-201ENST00000623827 446 ntBASIC20.29■□□□□ 0.84
CDC27P30260 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC27P30260 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDC27P30260 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC27P30260 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC27P30260 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC27P30260 AC116353.5-201ENST00000638148 1699 ntBASIC20.29■□□□□ 0.84
CDC27P30260 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDC27P30260 AC016396.2-201ENST00000562575 1417 ntBASIC20.28■□□□□ 0.84
CDC27P30260 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDC27P30260 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC27P30260 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms