Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.57■□□□□ 0.72
CTGFP29279 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.57■□□□□ 0.72
CTGFP29279 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.57■□□□□ 0.72
CTGFP29279 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CTGFP29279 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.57■□□□□ 0.72
CTGFP29279 AC025048.6-201ENST00000634326 1161 ntBASIC19.57■□□□□ 0.72
CTGFP29279 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 AC084121.4-201ENST00000641598 221 ntBASIC19.57■□□□□ 0.72
CTGFP29279 AF228730.8-201ENST00000642140 221 ntBASIC19.57■□□□□ 0.72
CTGFP29279 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CTGFP29279 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 CROCCP3-202ENST00000420820 1947 ntBASIC19.57■□□□□ 0.72
CTGFP29279 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.56■□□□□ 0.72
CTGFP29279 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTGFP29279 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTGFP29279 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTGFP29279 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTGFP29279 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CTGFP29279 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.56■□□□□ 0.72
CTGFP29279 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTGFP29279 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CTGFP29279 HMGA1P7-201ENST00000406908 502 ntBASIC19.56■□□□□ 0.72
CTGFP29279 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.56■□□□□ 0.72
CTGFP29279 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.56■□□□□ 0.72
CTGFP29279 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.56■□□□□ 0.72
CTGFP29279 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTGFP29279 AL596325.1-201ENST00000563991 1082 ntBASIC19.56■□□□□ 0.72
CTGFP29279 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.56■□□□□ 0.72
CTGFP29279 SPDYE22P-201ENST00000582158 798 ntBASIC19.56■□□□□ 0.72
CTGFP29279 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTGFP29279 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CTGFP29279 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.56■□□□□ 0.72
CTGFP29279 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTGFP29279 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTGFP29279 UXT-AS1-201ENST00000590504 1525 ntBASIC19.56■□□□□ 0.72
CTGFP29279 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTGFP29279 AL020996.1-203ENST00000536896 2307 ntBASIC19.56■□□□□ 0.72
CTGFP29279 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.55■□□□□ 0.72
CTGFP29279 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 NME2P1-201ENST00000426182 414 ntBASIC19.55■□□□□ 0.72
CTGFP29279 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.55■□□□□ 0.72
CTGFP29279 AC004890.2-204ENST00000481968 304 ntBASIC19.55■□□□□ 0.72
CTGFP29279 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.55■□□□□ 0.72
CTGFP29279 CR383656.12-201ENST00000549567 513 ntBASIC19.55■□□□□ 0.72
CTGFP29279 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.55■□□□□ 0.72
CTGFP29279 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.55■□□□□ 0.72
CTGFP29279 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.55■□□□□ 0.72
CTGFP29279 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.55■□□□□ 0.72
CTGFP29279 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTGFP29279 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTGFP29279 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.54■□□□□ 0.72
CTGFP29279 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTGFP29279 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.54■□□□□ 0.72
CTGFP29279 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTGFP29279 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTGFP29279 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.54■□□□□ 0.72
CTGFP29279 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.54■□□□□ 0.72
CTGFP29279 COX5BP8-201ENST00000416911 349 ntBASIC19.54■□□□□ 0.72
CTGFP29279 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTGFP29279 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.54■□□□□ 0.72
CTGFP29279 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.54■□□□□ 0.72
CTGFP29279 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTGFP29279 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.54■□□□□ 0.72
CTGFP29279 MIR4515-201ENST00000584082 81 ntBASIC19.54■□□□□ 0.72
CTGFP29279 AL662799.1-202ENST00000614205 422 ntBASIC19.54■□□□□ 0.72
CTGFP29279 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.54■□□□□ 0.72
CTGFP29279 AC135776.1-201ENST00000319817 2481 ntBASIC19.54■□□□□ 0.72
CTGFP29279 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTGFP29279 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.54■□□□□ 0.72
CTGFP29279 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTGFP29279 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.54■□□□□ 0.72
CTGFP29279 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTGFP29279 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTGFP29279 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.53■□□□□ 0.72
CTGFP29279 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.53■□□□□ 0.72
CTGFP29279 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.53■□□□□ 0.72
CTGFP29279 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms