Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MMP8P22894 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.42■□□□□ 0.54
MMP8P22894 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP8P22894 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP8P22894 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
MMP8P22894 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
MMP8P22894 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MMP8P22894 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 PMPCAP1-201ENST00000508114 1576 ntBASIC18.42■□□□□ 0.54
MMP8P22894 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP8P22894 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MMP8P22894 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MMP8P22894 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 AC003669.1-201ENST00000334569 611 ntBASIC18.41■□□□□ 0.54
MMP8P22894 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
MMP8P22894 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.41■□□□□ 0.54
MMP8P22894 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.41■□□□□ 0.54
MMP8P22894 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP8P22894 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.41■□□□□ 0.54
MMP8P22894 AC073592.5-201ENST00000624854 528 ntBASIC18.41■□□□□ 0.54
MMP8P22894 AP000867.4-201ENST00000641616 219 ntBASIC18.41■□□□□ 0.54
MMP8P22894 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MMP8P22894 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP8P22894 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MMP8P22894 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
MMP8P22894 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.41■□□□□ 0.54
MMP8P22894 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MMP8P22894 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP8P22894 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MMP8P22894 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
MMP8P22894 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
MMP8P22894 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.4■□□□□ 0.54
MMP8P22894 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.4■□□□□ 0.54
MMP8P22894 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
MMP8P22894 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MMP8P22894 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.4■□□□□ 0.54
MMP8P22894 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 STK19B-204ENST00000512515 211 ntBASIC18.4■□□□□ 0.54
MMP8P22894 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP8P22894 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP8P22894 MIR5100-201ENST00000579544 119 ntBASIC18.4■□□□□ 0.54
MMP8P22894 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.4■□□□□ 0.54
MMP8P22894 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.4■□□□□ 0.54
MMP8P22894 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP8P22894 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
MMP8P22894 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP8P22894 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP8P22894 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP8P22894 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
MMP8P22894 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MMP8P22894 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MMP8P22894 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
MMP8P22894 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.39■□□□□ 0.53
MMP8P22894 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MMP8P22894 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
MMP8P22894 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MMP8P22894 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP8P22894 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP8P22894 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.39■□□□□ 0.53
MMP8P22894 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.39■□□□□ 0.53
MMP8P22894 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms