Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC002347.1-201ENST00000569543 541 ntBASIC20.27■□□□□ 0.84
ERCC3P19447 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ERCC3P19447 AP001160.2-201ENST00000596071 487 ntBASIC20.27■□□□□ 0.84
ERCC3P19447 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.27■□□□□ 0.84
ERCC3P19447 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC3P19447 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC3P19447 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.27■□□□□ 0.84
ERCC3P19447 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC3P19447 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ERCC3P19447 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
ERCC3P19447 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ERCC3P19447 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ERCC3P19447 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ERCC3P19447 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.26■□□□□ 0.83
ERCC3P19447 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC3P19447 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ERCC3P19447 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC3P19447 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC3P19447 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC3P19447 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 AL020989.1-201ENST00000422979 469 ntBASIC20.26■□□□□ 0.83
ERCC3P19447 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.26■□□□□ 0.83
ERCC3P19447 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.26■□□□□ 0.83
ERCC3P19447 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ERCC3P19447 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 AL589182.2-201ENST00000619332 1049 ntBASIC20.26■□□□□ 0.83
ERCC3P19447 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ERCC3P19447 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC3P19447 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC3P19447 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC3P19447 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.26■□□□□ 0.83
ERCC3P19447 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERCC3P19447 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.26■□□□□ 0.83
ERCC3P19447 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 AL353593.2-201ENST00000602529 1483 ntBASIC20.25■□□□□ 0.83
ERCC3P19447 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC3P19447 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ERCC3P19447 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC3P19447 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ERCC3P19447 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.25■□□□□ 0.83
ERCC3P19447 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.25■□□□□ 0.83
ERCC3P19447 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.25■□□□□ 0.83
ERCC3P19447 AC004967.1-201ENST00000453589 447 ntBASIC20.25■□□□□ 0.83
ERCC3P19447 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.25■□□□□ 0.83
ERCC3P19447 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC3P19447 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC3P19447 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.25■□□□□ 0.83
ERCC3P19447 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.25■□□□□ 0.83
ERCC3P19447 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.25■□□□□ 0.83
ERCC3P19447 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC3P19447 AL049757.1-201ENST00000616842 1596 ntBASIC20.25■□□□□ 0.83
ERCC3P19447 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC3P19447 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ERCC3P19447 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.24■□□□□ 0.83
ERCC3P19447 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
ERCC3P19447 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ERCC3P19447 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.24■□□□□ 0.83
ERCC3P19447 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ERCC3P19447 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC3P19447 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ERCC3P19447 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.24■□□□□ 0.83
ERCC3P19447 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ERCC3P19447 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.24■□□□□ 0.83
ERCC3P19447 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.24■□□□□ 0.83
ERCC3P19447 KRT18P2-201ENST00000447938 1258 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms