Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.36■□□□□ 0.37
NELFEP18615 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.36■□□□□ 0.37
NELFEP18615 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.36■□□□□ 0.37
NELFEP18615 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.36■□□□□ 0.37
NELFEP18615 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.36■□□□□ 0.37
NELFEP18615 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
NELFEP18615 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.36■□□□□ 0.37
NELFEP18615 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.36■□□□□ 0.37
NELFEP18615 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.36■□□□□ 0.37
NELFEP18615 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NELFEP18615 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.36■□□□□ 0.37
NELFEP18615 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.36■□□□□ 0.37
NELFEP18615 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
NELFEP18615 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.36■□□□□ 0.37
NELFEP18615 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.36■□□□□ 0.37
NELFEP18615 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.36■□□□□ 0.37
NELFEP18615 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
NELFEP18615 AC141586.5-201ENST00000624546 2050 ntBASIC17.35■□□□□ 0.37
NELFEP18615 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NELFEP18615 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.35■□□□□ 0.37
NELFEP18615 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NELFEP18615 MINOS1P3-201ENST00000457048 203 ntBASIC17.35■□□□□ 0.37
NELFEP18615 EMBP1-201ENST00000458200 901 ntBASIC17.35■□□□□ 0.37
NELFEP18615 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.35■□□□□ 0.37
NELFEP18615 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.35■□□□□ 0.37
NELFEP18615 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NELFEP18615 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.35■□□□□ 0.37
NELFEP18615 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 LINC01126-201ENST00000623515 1646 ntBASIC17.35■□□□□ 0.37
NELFEP18615 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.35■□□□□ 0.37
NELFEP18615 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.35■□□□□ 0.37
NELFEP18615 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NELFEP18615 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.35■□□□□ 0.37
NELFEP18615 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NELFEP18615 NKILA-202ENST00000614771 2598 ntBASIC17.35■□□□□ 0.37
NELFEP18615 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
NELFEP18615 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NELFEP18615 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
NELFEP18615 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NELFEP18615 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.34■□□□□ 0.37
NELFEP18615 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.34■□□□□ 0.37
NELFEP18615 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
NELFEP18615 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 KRT16P4-201ENST00000453883 522 ntBASIC17.34■□□□□ 0.37
NELFEP18615 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.34■□□□□ 0.37
NELFEP18615 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NELFEP18615 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.34■□□□□ 0.37
NELFEP18615 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.34■□□□□ 0.37
NELFEP18615 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.34■□□□□ 0.37
NELFEP18615 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.34■□□□□ 0.37
NELFEP18615 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.34■□□□□ 0.37
NELFEP18615 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.34■□□□□ 0.37
NELFEP18615 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.34■□□□□ 0.37
NELFEP18615 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NELFEP18615 UBALD1-205ENST00000590891 2641 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms