Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM1P09493 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.34■□□□□ 0.69
TPM1P09493 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TPM1P09493 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.34■□□□□ 0.69
TPM1P09493 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TPM1P09493 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.34■□□□□ 0.69
TPM1P09493 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TPM1P09493 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 MIR1238-201ENST00000408483 83 ntBASIC19.34■□□□□ 0.69
TPM1P09493 GCSHP5-201ENST00000443090 522 ntBASIC19.34■□□□□ 0.69
TPM1P09493 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.34■□□□□ 0.69
TPM1P09493 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.34■□□□□ 0.69
TPM1P09493 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.34■□□□□ 0.69
TPM1P09493 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.34■□□□□ 0.69
TPM1P09493 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
TPM1P09493 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.34■□□□□ 0.69
TPM1P09493 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPM1P09493 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.33■□□□□ 0.69
TPM1P09493 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TPM1P09493 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.33■□□□□ 0.69
TPM1P09493 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TPM1P09493 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.33■□□□□ 0.69
TPM1P09493 PCDHB19P-201ENST00000570871 2371 ntBASIC19.33■□□□□ 0.69
TPM1P09493 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 TSPY14P-201ENST00000303979 915 ntBASIC19.33■□□□□ 0.68
TPM1P09493 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.33■□□□□ 0.68
TPM1P09493 AL390955.1-201ENST00000428694 934 ntBASIC19.33■□□□□ 0.68
TPM1P09493 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.33■□□□□ 0.68
TPM1P09493 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.33■□□□□ 0.68
TPM1P09493 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.33■□□□□ 0.68
TPM1P09493 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.33■□□□□ 0.68
TPM1P09493 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TPM1P09493 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.33■□□□□ 0.68
TPM1P09493 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TPM1P09493 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.33■□□□□ 0.68
TPM1P09493 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TPM1P09493 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TPM1P09493 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.33■□□□□ 0.68
TPM1P09493 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TPM1P09493 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TPM1P09493 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM1P09493 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TPM1P09493 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM1P09493 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TPM1P09493 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM1P09493 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM1P09493 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM1P09493 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.32■□□□□ 0.68
TPM1P09493 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 TSPY20P-201ENST00000450910 630 ntBASIC19.32■□□□□ 0.68
TPM1P09493 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TPM1P09493 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM1P09493 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM1P09493 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.32■□□□□ 0.68
TPM1P09493 EGLN1P1-201ENST00000531623 762 ntBASIC19.32■□□□□ 0.68
TPM1P09493 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 NEK4P2-201ENST00000580004 1012 ntBASIC19.32■□□□□ 0.68
TPM1P09493 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.32■□□□□ 0.68
TPM1P09493 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TPM1P09493 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
TPM1P09493 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TPM1P09493 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.31■□□□□ 0.68
TPM1P09493 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM1P09493 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TPM1P09493 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms