Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP2P08253 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP2P08253 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MMP2P08253 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP2P08253 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP2P08253 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP2P08253 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP2P08253 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP2P08253 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP2P08253 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.61■□□□□ 0.41
MMP2P08253 RBM17P3-201ENST00000417687 1192 ntBASIC17.61■□□□□ 0.41
MMP2P08253 AL020989.1-201ENST00000422979 469 ntBASIC17.61■□□□□ 0.41
MMP2P08253 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.61■□□□□ 0.41
MMP2P08253 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
MMP2P08253 AF238378.1-201ENST00000526806 358 ntBASIC17.61■□□□□ 0.41
MMP2P08253 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP2P08253 AC004817.3-201ENST00000602957 2129 ntBASIC17.61■□□□□ 0.41
MMP2P08253 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MMP2P08253 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP2P08253 AL355877.3-201ENST00000622820 899 ntBASIC17.61■□□□□ 0.41
MMP2P08253 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP2P08253 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
MMP2P08253 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MMP2P08253 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP2P08253 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP2P08253 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP2P08253 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MMP2P08253 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.6■□□□□ 0.41
MMP2P08253 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 FGFR3P6-201ENST00000457012 610 ntBASIC17.6■□□□□ 0.41
MMP2P08253 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP2P08253 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
MMP2P08253 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.6■□□□□ 0.41
MMP2P08253 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 MTDHP3-201ENST00000594186 672 ntBASIC17.6■□□□□ 0.41
MMP2P08253 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP2P08253 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP2P08253 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP2P08253 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP2P08253 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MMP2P08253 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
MMP2P08253 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MMP2P08253 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP2P08253 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MMP2P08253 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MMP2P08253 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP2P08253 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MMP2P08253 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP2P08253 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP2P08253 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP2P08253 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MMP2P08253 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP2P08253 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
MMP2P08253 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP2P08253 SAPCD2P3-201ENST00000455031 850 ntBASIC17.59■□□□□ 0.41
MMP2P08253 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.59■□□□□ 0.41
MMP2P08253 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.59■□□□□ 0.41
MMP2P08253 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP2P08253 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.59■□□□□ 0.41
MMP2P08253 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP2P08253 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP2P08253 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP2P08253 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP2P08253 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms