Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC22.82■■□□□ 1.24
COL5A2P05997 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
COL5A2P05997 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL5A2P05997 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.81■■□□□ 1.24
COL5A2P05997 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL5A2P05997 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC22.81■■□□□ 1.24
COL5A2P05997 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.81■■□□□ 1.24
COL5A2P05997 AC092580.3-201ENST00000430932 139 ntBASIC22.81■■□□□ 1.24
COL5A2P05997 PPP6R2P1-201ENST00000450880 1275 ntBASIC22.81■■□□□ 1.24
COL5A2P05997 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL5A2P05997 GATD1-206ENST00000526325 756 ntTSL 5 BASIC22.81■■□□□ 1.24
COL5A2P05997 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
COL5A2P05997 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL5A2P05997 AL009183.1-201ENST00000603760 355 ntBASIC22.81■■□□□ 1.24
COL5A2P05997 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.81■■□□□ 1.24
COL5A2P05997 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL5A2P05997 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.81■■□□□ 1.24
COL5A2P05997 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
COL5A2P05997 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL5A2P05997 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL5A2P05997 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL5A2P05997 GRAP-202ENST00000395635 834 ntTSL 2 BASIC22.8■■□□□ 1.24
COL5A2P05997 HMGA1P7-201ENST00000406908 502 ntBASIC22.8■■□□□ 1.24
COL5A2P05997 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
COL5A2P05997 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC22.8■■□□□ 1.24
COL5A2P05997 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC22.8■■□□□ 1.24
COL5A2P05997 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC22.8■■□□□ 1.24
COL5A2P05997 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC22.8■■□□□ 1.24
COL5A2P05997 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
COL5A2P05997 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.8■■□□□ 1.24
COL5A2P05997 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC22.8■■□□□ 1.24
COL5A2P05997 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL5A2P05997 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL5A2P05997 REXO1L9P-201ENST00000604264 2108 ntBASIC22.8■■□□□ 1.24
COL5A2P05997 HNRNPRP1-201ENST00000453465 1695 ntBASIC22.8■■□□□ 1.24
COL5A2P05997 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL5A2P05997 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC22.8■■□□□ 1.24
COL5A2P05997 CD81-202ENST00000381036 880 ntTSL 3 BASIC22.79■■□□□ 1.24
COL5A2P05997 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC22.79■■□□□ 1.24
COL5A2P05997 IGHV3-42-201ENST00000520410 361 ntBASIC22.79■■□□□ 1.24
COL5A2P05997 AL161645.1-201ENST00000622716 1255 ntBASIC22.79■■□□□ 1.24
COL5A2P05997 KRT18P55-202ENST00000578578 1546 ntBASIC22.79■■□□□ 1.24
COL5A2P05997 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.79■■□□□ 1.24
COL5A2P05997 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL5A2P05997 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL5A2P05997 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL5A2P05997 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL5A2P05997 GNAS-203ENST00000306120 1878 ntBASIC22.79■■□□□ 1.24
COL5A2P05997 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL5A2P05997 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
COL5A2P05997 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.79■■□□□ 1.24
COL5A2P05997 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
COL5A2P05997 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL5A2P05997 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC22.79■■□□□ 1.24
COL5A2P05997 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC22.79■■□□□ 1.24
COL5A2P05997 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.79■■□□□ 1.24
COL5A2P05997 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC22.79■■□□□ 1.24
COL5A2P05997 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC22.79■■□□□ 1.24
COL5A2P05997 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
COL5A2P05997 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL5A2P05997 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC22.79■■□□□ 1.24
COL5A2P05997 MIR6080-201ENST00000617359 66 ntBASIC22.79■■□□□ 1.24
COL5A2P05997 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL5A2P05997 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL5A2P05997 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
COL5A2P05997 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
COL5A2P05997 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.78■■□□□ 1.24
COL5A2P05997 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.78■■□□□ 1.24
COL5A2P05997 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL5A2P05997 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL5A2P05997 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
COL5A2P05997 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.78■■□□□ 1.24
COL5A2P05997 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.78■■□□□ 1.24
COL5A2P05997 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.78■■□□□ 1.24
COL5A2P05997 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL5A2P05997 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL5A2P05997 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL5A2P05997 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC22.78■■□□□ 1.24
COL5A2P05997 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
COL5A2P05997 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.78■■□□□ 1.24
COL5A2P05997 KRT8P23-201ENST00000560090 1207 ntBASIC22.78■■□□□ 1.24
COL5A2P05997 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC22.78■■□□□ 1.24
COL5A2P05997 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 GOLGA6L11P-201ENST00000417252 1298 ntBASIC22.77■■□□□ 1.24
COL5A2P05997 SPDYE7P-202ENST00000420373 878 ntBASIC22.77■■□□□ 1.24
COL5A2P05997 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms