Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
MT-ND1P03886 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.57■□□□□ 0.24
MT-ND1P03886 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.57■□□□□ 0.24
MT-ND1P03886 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
MT-ND1P03886 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MT-ND1P03886 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.57■□□□□ 0.24
MT-ND1P03886 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.57■□□□□ 0.24
MT-ND1P03886 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.57■□□□□ 0.24
MT-ND1P03886 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.57■□□□□ 0.24
MT-ND1P03886 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 LINC01451-201ENST00000623792 534 ntBASIC16.57■□□□□ 0.24
MT-ND1P03886 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.57■□□□□ 0.24
MT-ND1P03886 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND1P03886 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
MT-ND1P03886 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
MT-ND1P03886 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.56■□□□□ 0.24
MT-ND1P03886 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
MT-ND1P03886 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
MT-ND1P03886 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.56■□□□□ 0.24
MT-ND1P03886 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.56■□□□□ 0.24
MT-ND1P03886 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MT-ND1P03886 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.56■□□□□ 0.24
MT-ND1P03886 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.56■□□□□ 0.24
MT-ND1P03886 AC092171.3-201ENST00000610122 2651 ntBASIC16.56■□□□□ 0.24
MT-ND1P03886 HYMAI-201ENST00000635591 3347 ntBASIC16.56■□□□□ 0.24
MT-ND1P03886 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
MT-ND1P03886 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.56■□□□□ 0.24
MT-ND1P03886 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MT-ND1P03886 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
MT-ND1P03886 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 AL162727.3-201ENST00000635661 2787 ntBASIC16.55■□□□□ 0.24
MT-ND1P03886 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
MT-ND1P03886 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.55■□□□□ 0.24
MT-ND1P03886 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND1P03886 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND1P03886 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MT-ND1P03886 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MT-ND1P03886 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.55■□□□□ 0.24
MT-ND1P03886 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND1P03886 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.55■□□□□ 0.24
MT-ND1P03886 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MT-ND1P03886 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms