Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.96■□□□□ 0.95
COL1A1P02452 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
COL1A1P02452 AL390961.4-201ENST00000623958 2535 ntBASIC20.96■□□□□ 0.95
COL1A1P02452 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A1P02452 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
COL1A1P02452 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.96■□□□□ 0.95
COL1A1P02452 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.96■□□□□ 0.95
COL1A1P02452 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.96■□□□□ 0.95
COL1A1P02452 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COL1A1P02452 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.95■□□□□ 0.94
COL1A1P02452 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.95■□□□□ 0.94
COL1A1P02452 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
COL1A1P02452 PDPK2P-202ENST00000562415 1191 ntBASIC20.95■□□□□ 0.94
COL1A1P02452 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL1A1P02452 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COL1A1P02452 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.95■□□□□ 0.94
COL1A1P02452 AL078644.1-201ENST00000609881 752 ntBASIC20.95■□□□□ 0.94
COL1A1P02452 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.95■□□□□ 0.94
COL1A1P02452 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL1A1P02452 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
COL1A1P02452 NOC2LP1-202ENST00000452600 2235 ntBASIC20.95■□□□□ 0.94
COL1A1P02452 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.95■□□□□ 0.94
COL1A1P02452 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
COL1A1P02452 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
COL1A1P02452 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.95■□□□□ 0.94
COL1A1P02452 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A1P02452 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
COL1A1P02452 SLC25A1P3-201ENST00000395415 828 ntBASIC20.94■□□□□ 0.94
COL1A1P02452 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL1A1P02452 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.94■□□□□ 0.94
COL1A1P02452 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL1A1P02452 PAWRP1-201ENST00000451083 565 ntBASIC20.94■□□□□ 0.94
COL1A1P02452 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
COL1A1P02452 SLC25A6P2-201ENST00000497974 877 ntBASIC20.94■□□□□ 0.94
COL1A1P02452 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.94■□□□□ 0.94
COL1A1P02452 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.94■□□□□ 0.94
COL1A1P02452 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.94■□□□□ 0.94
COL1A1P02452 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.94■□□□□ 0.94
COL1A1P02452 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.94■□□□□ 0.94
COL1A1P02452 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.94■□□□□ 0.94
COL1A1P02452 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.94■□□□□ 0.94
COL1A1P02452 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A1P02452 AC027612.4-201ENST00000605371 583 ntBASIC20.94■□□□□ 0.94
COL1A1P02452 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A1P02452 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A1P02452 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
COL1A1P02452 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.93■□□□□ 0.94
COL1A1P02452 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL1A1P02452 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A1P02452 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.93■□□□□ 0.94
COL1A1P02452 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A1P02452 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A1P02452 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.93■□□□□ 0.94
COL1A1P02452 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.93■□□□□ 0.94
COL1A1P02452 AC087163.2-201ENST00000457299 853 ntBASIC20.93■□□□□ 0.94
COL1A1P02452 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.93■□□□□ 0.94
COL1A1P02452 AP002472.1-201ENST00000577490 586 ntBASIC20.93■□□□□ 0.94
COL1A1P02452 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.93■□□□□ 0.94
COL1A1P02452 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A1P02452 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A1P02452 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.92■□□□□ 0.94
COL1A1P02452 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A1P02452 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A1P02452 AL645939.2-201ENST00000427340 991 ntBASIC20.92■□□□□ 0.94
COL1A1P02452 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.92■□□□□ 0.94
COL1A1P02452 SLC25A6P5-201ENST00000435663 894 ntBASIC20.92■□□□□ 0.94
COL1A1P02452 RHOQP3-201ENST00000437982 621 ntBASIC20.92■□□□□ 0.94
COL1A1P02452 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.92■□□□□ 0.94
COL1A1P02452 AP000344.2-201ENST00000512987 629 ntBASIC20.92■□□□□ 0.94
COL1A1P02452 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A1P02452 KRT19P2-202ENST00000557173 1012 ntBASIC20.92■□□□□ 0.94
COL1A1P02452 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL1A1P02452 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COL1A1P02452 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.92■□□□□ 0.94
COL1A1P02452 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A1P02452 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A1P02452 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.92■□□□□ 0.94
COL1A1P02452 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A1P02452 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL1A1P02452 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms