Protein–RNA interactions for Protein: O95863

SNAI1, Zinc finger protein SNAI1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1O95863 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI1O95863 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAI1O95863 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
SNAI1O95863 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAI1O95863 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI1O95863 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI1O95863 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI1O95863 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNAI1O95863 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.44■□□□□ 0.7
SNAI1O95863 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.44■□□□□ 0.7
SNAI1O95863 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.44■□□□□ 0.7
SNAI1O95863 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.44■□□□□ 0.7
SNAI1O95863 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.44■□□□□ 0.7
SNAI1O95863 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.44■□□□□ 0.7
SNAI1O95863 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.44■□□□□ 0.7
SNAI1O95863 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.44■□□□□ 0.7
SNAI1O95863 SPCS2P1-201ENST00000561636 679 ntBASIC19.44■□□□□ 0.7
SNAI1O95863 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.44■□□□□ 0.7
SNAI1O95863 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 AL139327.4-201ENST00000612362 153 ntBASIC19.44■□□□□ 0.7
SNAI1O95863 AC093512.1-201ENST00000617969 520 ntBASIC19.44■□□□□ 0.7
SNAI1O95863 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNAI1O95863 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SNAI1O95863 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.44■□□□□ 0.7
SNAI1O95863 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.44■□□□□ 0.7
SNAI1O95863 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI1O95863 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.44■□□□□ 0.7
SNAI1O95863 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SNAI1O95863 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.43■□□□□ 0.7
SNAI1O95863 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SNAI1O95863 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNAI1O95863 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAI1O95863 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAI1O95863 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.43■□□□□ 0.7
SNAI1O95863 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNAI1O95863 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.43■□□□□ 0.7
SNAI1O95863 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.43■□□□□ 0.7
SNAI1O95863 AC093520.2-201ENST00000561830 333 ntBASIC19.43■□□□□ 0.7
SNAI1O95863 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAI1O95863 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.43■□□□□ 0.7
SNAI1O95863 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.43■□□□□ 0.7
SNAI1O95863 AC138028.4-201ENST00000564984 1845 ntBASIC19.43■□□□□ 0.7
SNAI1O95863 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 AC129492.6-201ENST00000611383 1305 ntBASIC19.43■□□□□ 0.7
SNAI1O95863 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAI1O95863 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI1O95863 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SNAI1O95863 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAI1O95863 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNAI1O95863 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.42■□□□□ 0.7
SNAI1O95863 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SNAI1O95863 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNAI1O95863 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SNAI1O95863 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.42■□□□□ 0.7
SNAI1O95863 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.42■□□□□ 0.7
SNAI1O95863 AC112191.1-201ENST00000523689 701 ntBASIC19.42■□□□□ 0.7
SNAI1O95863 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.42■□□□□ 0.7
SNAI1O95863 AC011467.4-201ENST00000594891 528 ntBASIC19.42■□□□□ 0.7
SNAI1O95863 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SNAI1O95863 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNAI1O95863 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI1O95863 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.41■□□□□ 0.7
SNAI1O95863 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAI1O95863 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.41■□□□□ 0.7
SNAI1O95863 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAI1O95863 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms