Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT3O75175 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNOT3O75175 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNOT3O75175 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CNOT3O75175 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNOT3O75175 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNOT3O75175 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.04■□□□□ 0.32
CNOT3O75175 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CNOT3O75175 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.04■□□□□ 0.32
CNOT3O75175 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 AC079781.3-201ENST00000449110 356 ntBASIC17.04■□□□□ 0.32
CNOT3O75175 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.04■□□□□ 0.32
CNOT3O75175 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.04■□□□□ 0.32
CNOT3O75175 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.04■□□□□ 0.32
CNOT3O75175 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 AC011840.4-201ENST00000578471 627 ntBASIC17.04■□□□□ 0.32
CNOT3O75175 AL031008.1-201ENST00000619963 541 ntBASIC17.04■□□□□ 0.32
CNOT3O75175 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.04■□□□□ 0.32
CNOT3O75175 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 FER1L4-210ENST00000615531 5998 ntBASIC17.04■□□□□ 0.32
CNOT3O75175 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT3O75175 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT3O75175 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 LINC00602-201ENST00000629776 2065 ntBASIC17.03■□□□□ 0.32
CNOT3O75175 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.03■□□□□ 0.32
CNOT3O75175 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CNOT3O75175 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.03■□□□□ 0.32
CNOT3O75175 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CNOT3O75175 TSPY12P-201ENST00000421279 868 ntBASIC17.03■□□□□ 0.32
CNOT3O75175 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CNOT3O75175 AC068472.1-201ENST00000474589 881 ntBASIC17.03■□□□□ 0.32
CNOT3O75175 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.03■□□□□ 0.32
CNOT3O75175 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.03■□□□□ 0.32
CNOT3O75175 BNIP3P18-201ENST00000593976 575 ntBASIC17.03■□□□□ 0.32
CNOT3O75175 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 AC104692.2-201ENST00000603054 253 ntBASIC17.03■□□□□ 0.32
CNOT3O75175 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CNOT3O75175 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 LINC00896-202ENST00000609602 2128 ntBASIC17.03■□□□□ 0.32
CNOT3O75175 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CNOT3O75175 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.03■□□□□ 0.32
CNOT3O75175 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNOT3O75175 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CNOT3O75175 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CNOT3O75175 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.02■□□□□ 0.32
CNOT3O75175 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNOT3O75175 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CNOT3O75175 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms