Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM13O60858 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM13O60858 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM13O60858 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM13O60858 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM13O60858 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM13O60858 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM13O60858 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.28■□□□□ 0.36
TRIM13O60858 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM13O60858 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRIM13O60858 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM13O60858 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM13O60858 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TRIM13O60858 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM13O60858 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRIM13O60858 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRIM13O60858 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 UBALD1-205ENST00000590891 2641 ntBASIC17.27■□□□□ 0.36
TRIM13O60858 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM13O60858 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM13O60858 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM13O60858 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRIM13O60858 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM13O60858 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM13O60858 AL138966.2-201ENST00000621997 464 ntBASIC17.27■□□□□ 0.36
TRIM13O60858 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM13O60858 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM13O60858 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM13O60858 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM13O60858 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM13O60858 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM13O60858 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM13O60858 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM13O60858 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRIM13O60858 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM13O60858 LINC01568-207ENST00000641790 1380 ntBASIC17.27■□□□□ 0.35
TRIM13O60858 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM13O60858 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM13O60858 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM13O60858 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM13O60858 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TRIM13O60858 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM13O60858 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM13O60858 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM13O60858 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM13O60858 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM13O60858 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM13O60858 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM13O60858 LINC02012-201ENST00000608206 1725 ntBASIC17.26■□□□□ 0.35
TRIM13O60858 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM13O60858 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM13O60858 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM13O60858 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM13O60858 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM13O60858 AC046185.3-201ENST00000623228 1824 ntBASIC17.26■□□□□ 0.35
TRIM13O60858 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM13O60858 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM13O60858 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM13O60858 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM13O60858 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM13O60858 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM13O60858 KRT18P22-201ENST00000402024 1347 ntBASIC17.25■□□□□ 0.35
TRIM13O60858 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM13O60858 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM13O60858 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM13O60858 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM13O60858 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM13O60858 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM13O60858 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM13O60858 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM13O60858 CROCCP1-201ENST00000426910 5675 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms