Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PDE6DO43924 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.62□□□□□ -0.23
PDE6DO43924 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.62□□□□□ -0.23
PDE6DO43924 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.62□□□□□ -0.23
PDE6DO43924 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.62□□□□□ -0.23
PDE6DO43924 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.62□□□□□ -0.23
PDE6DO43924 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.62□□□□□ -0.23
PDE6DO43924 AC008687.5-201ENST00000593746 558 ntBASIC13.62□□□□□ -0.23
PDE6DO43924 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PDE6DO43924 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.62□□□□□ -0.23
PDE6DO43924 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
PDE6DO43924 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
PDE6DO43924 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.62□□□□□ -0.23
PDE6DO43924 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PDE6DO43924 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.61□□□□□ -0.23
PDE6DO43924 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PDE6DO43924 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
PDE6DO43924 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.61□□□□□ -0.23
PDE6DO43924 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
PDE6DO43924 NIFKP9-201ENST00000419265 221 ntBASIC13.61□□□□□ -0.23
PDE6DO43924 FAM207BP-201ENST00000447172 505 ntBASIC13.61□□□□□ -0.23
PDE6DO43924 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.61□□□□□ -0.23
PDE6DO43924 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.61□□□□□ -0.23
PDE6DO43924 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PDE6DO43924 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.61□□□□□ -0.23
PDE6DO43924 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 MIR6821-201ENST00000617625 74 ntBASIC13.61□□□□□ -0.23
PDE6DO43924 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.61□□□□□ -0.23
PDE6DO43924 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
PDE6DO43924 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
PDE6DO43924 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.61□□□□□ -0.23
PDE6DO43924 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.61□□□□□ -0.23
PDE6DO43924 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
PDE6DO43924 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PDE6DO43924 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.61□□□□□ -0.23
PDE6DO43924 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.61□□□□□ -0.23
PDE6DO43924 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.61□□□□□ -0.23
PDE6DO43924 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PDE6DO43924 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.6□□□□□ -0.23
PDE6DO43924 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.6□□□□□ -0.23
PDE6DO43924 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.6□□□□□ -0.23
PDE6DO43924 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDE6DO43924 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDE6DO43924 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.6□□□□□ -0.23
PDE6DO43924 LYSMD4-203ENST00000378904 2122 ntBASIC13.6□□□□□ -0.23
PDE6DO43924 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
PDE6DO43924 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDE6DO43924 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.6□□□□□ -0.23
PDE6DO43924 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PDE6DO43924 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDE6DO43924 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms