Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.66■□□□□ 0.74
ACTN4O43707 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.66■□□□□ 0.74
ACTN4O43707 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.66■□□□□ 0.74
ACTN4O43707 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.66■□□□□ 0.74
ACTN4O43707 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.66■□□□□ 0.74
ACTN4O43707 AC122714.2-201ENST00000502787 707 ntBASIC19.66■□□□□ 0.74
ACTN4O43707 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.66■□□□□ 0.74
ACTN4O43707 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.66■□□□□ 0.74
ACTN4O43707 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.66■□□□□ 0.74
ACTN4O43707 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.66■□□□□ 0.74
ACTN4O43707 IGHV3-41-201ENST00000613121 348 ntBASIC19.66■□□□□ 0.74
ACTN4O43707 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 AC005332.1-201ENST00000577698 1310 ntBASIC19.66■□□□□ 0.74
ACTN4O43707 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.66■□□□□ 0.74
ACTN4O43707 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.66■□□□□ 0.74
ACTN4O43707 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACTN4O43707 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ACTN4O43707 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ACTN4O43707 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ACTN4O43707 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.65■□□□□ 0.74
ACTN4O43707 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.65■□□□□ 0.74
ACTN4O43707 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.65■□□□□ 0.74
ACTN4O43707 KRT18P21-201ENST00000515767 1272 ntBASIC19.65■□□□□ 0.74
ACTN4O43707 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.65■□□□□ 0.74
ACTN4O43707 AP005901.3-202ENST00000581653 237 ntBASIC19.65■□□□□ 0.74
ACTN4O43707 AL121956.5-201ENST00000625261 221 ntBASIC19.65■□□□□ 0.74
ACTN4O43707 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.65■□□□□ 0.74
ACTN4O43707 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.65■□□□□ 0.74
ACTN4O43707 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ACTN4O43707 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACTN4O43707 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ACTN4O43707 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.65■□□□□ 0.74
ACTN4O43707 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.64■□□□□ 0.74
ACTN4O43707 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ACTN4O43707 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ACTN4O43707 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ACTN4O43707 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACTN4O43707 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ACTN4O43707 FAM86EP-206ENST00000510506 987 ntBASIC19.64■□□□□ 0.73
ACTN4O43707 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ACTN4O43707 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.64■□□□□ 0.73
ACTN4O43707 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACTN4O43707 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACTN4O43707 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ACTN4O43707 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
ACTN4O43707 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACTN4O43707 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ACTN4O43707 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACTN4O43707 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ACTN4O43707 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
ACTN4O43707 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ACTN4O43707 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.63■□□□□ 0.73
ACTN4O43707 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ACTN4O43707 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.63■□□□□ 0.73
ACTN4O43707 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.63■□□□□ 0.73
ACTN4O43707 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ACTN4O43707 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.63■□□□□ 0.73
ACTN4O43707 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.63■□□□□ 0.73
ACTN4O43707 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.63■□□□□ 0.73
ACTN4O43707 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms