Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 AC009336.1-201ENST00000608941 1553 ntBASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.44■□□□□ 0.38
TBC1D3FA6NER0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 AC138028.4-201ENST00000564984 1845 ntBASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 CRYGEP-201ENST00000412192 528 ntBASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 AC064836.3-201ENST00000607928 673 ntBASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.43■□□□□ 0.38
TBC1D3FA6NER0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 AC023274.1-201ENST00000418278 595 ntBASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 AC005104.2-201ENST00000427818 678 ntBASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 MIR3687-2-201ENST00000577708 61 ntBASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 AC010327.4-202ENST00000591484 748 ntBASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 MIR3687-1-201ENST00000614492 61 ntBASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3FA6NER0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 UPF3AP3-201ENST00000420996 769 ntBASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 RPS15P9-201ENST00000494093 319 ntBASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 MIR4751-201ENST00000578027 74 ntBASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3FA6NER0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms