Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 AC019129.2-201ENST00000609837 1235 ntBASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.15■□□□□ 0.34
CSNK1G3Q9Y6M4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CSNK1G3Q9Y6M4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 AL354751.1-201ENST00000412768 1863 ntBASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 MTDHP5-201ENST00000598980 586 ntBASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 AC064836.3-201ENST00000607928 673 ntBASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 AL691403.2-201ENST00000618460 490 ntBASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.14■□□□□ 0.33
CSNK1G3Q9Y6M4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms