Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 CA15P1-201ENST00000481698 905 ntBASIC16.62■□□□□ 0.25
AP4S1Q9Y587 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4S1Q9Y587 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 FSCN1P1-201ENST00000568912 1481 ntBASIC16.61■□□□□ 0.25
AP4S1Q9Y587 AC046185.3-201ENST00000623228 1824 ntBASIC16.61■□□□□ 0.25
AP4S1Q9Y587 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 AC104390.1-201ENST00000555663 520 ntBASIC16.61■□□□□ 0.25
AP4S1Q9Y587 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4S1Q9Y587 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 RNF216P1-203ENST00000404404 2427 ntBASIC16.6■□□□□ 0.25
AP4S1Q9Y587 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 AC092068.3-201ENST00000587894 2016 ntBASIC16.6■□□□□ 0.25
AP4S1Q9Y587 CYP2T1P-202ENST00000641596 2535 ntBASIC16.6■□□□□ 0.25
AP4S1Q9Y587 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms